CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_35751
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.contig_35751
T258090_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_35751.1
MADS box
15
62
KMNNESNLQVTFSKRRAGLFKKASELSTLCGAEIAIIVFSPGQKVFSF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
306 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL003158
Aedes aegypti
AAEL003158
I
0.000
AALB003384
Anopheles albimanus
AALB003384
I
0.000
AARA001486
Anopheles arabiensis
AARA001486
I
0.000
AATE008808
Anopheles atroparvus
AATE008808
I
0.000
ACOM028352
Anopheles coluzzii
ACOM028352
I
0.000
ACUA003130
Anopheles culicifacies
ACUA003130
I
0.000
ACYPI28321
Acyrthosiphon pisum
ACYPI28321
I
0.000
ADAC003085
Anopheles darlingi
ADAC003085
I
0.000
ADIR008273
Anopheles dirus
ADIR008273
I
0.000
AEPI009779
Anopheles epiroticus
AEPI009779
I
0.000
AFAF007403
Anopheles farauti
AFAF007403
I
0.000
AFUN002303
Anopheles funestus
AFUN002303
I
0.000
AGAP003406
Anopheles gambiae
AGAP003406
I
0.000
AMEC009026
Anopheles melas
AMEC009026
I
0.000
AMEM013111
Anopheles merus
AMEM013111
I
0.000
AMIN003870
Anopheles minimus
AMIN003870
I
0.000
AQUA010265
Anopheles quadriannulatus
AQUA010265
I
0.000
ASIS007877
Anopheles sinensis
ASIS007877
I
0.000
ASTEI03376
Anopheles stephensi
ASTEI03376
I
0.000
A_06265
Schistosoma haematobium
A_06265
I
0.000
BGIBMGA005045
Bombyx mori
BGIBMGA005045
N
0.000
CapteG70959
Capitella teleta
CapteG70959
I
0.000
Cflo_06253--XP_001122398.1_APIME
Camponotus floridanus
Cflo_06253--XP_001122398.1_APIME
I
0.000
CPIJ003723
Culex quinquefasciatus
CPIJ003723
I
0.000
CpipJ_CPIJ003723
Culex pipiens
CpipJ_CPIJ003723
I
0.000
D915_03631
Fasciola hepatica
D915_03631
I
0.000
ECANG7_00675
Echinococcus canadensis
ECANG7_00675
N
0.000
EmuJ_000101200
Echinococcus multilocularis
EmuJ_000101200
N
0.000
NKX2-3
Dasypus novemcinctus
ENSDNOG00000040342
I
0.000
ENSDNOG00000042382
Dasypus novemcinctus
ENSDNOG00000042382
I
0.000
ENSFALG00000015342
Ficedula albicollis
ENSFALG00000015342
I
0.000
ENSONIG00000010351
Oreochromis niloticus
ENSONIG00000010351
I
0.000
ENSPFOG00000022617
Poecilia formosa
ENSPFOG00000022617
I
0.000
ENSTRUG00000006200
Takifugu rubripes
ENSTRUG00000006200
I
0.000
fgenesh2_pg.scaffold_10000067
Branchiostoma floridae
fgenesh2_pg.scaffold_10000067
I
0.000
fgenesh2_pg.scaffold_63000032
Branchiostoma floridae
fgenesh2_pg.scaffold_63000032
I
0.000
HDID_0000204801
Hymenolepis diminuta
HDID_0000204801
N
0.000
HMEL009910
Heliconius melpomene
HMEL009910
N
0.000
HmN_000016500
Hymenolepis microstoma
HmN_000016500
N
0.000
HNAJ_0001194801
Hymenolepis nana
HNAJ_0001194801
N
0.000
KGM_09142
Danaus plexippus
KGM_09142
N
0.000
LLOJ009601
Lutzomyia longipalpis
LLOJ009601
I
0.000
LotgiG80572
Lottia gigantea
LotgiG80572
I
0.000
MCINX015546
Melitaea cinxia
MCINX015546
I
0.000
MESCA004778
Megaselia scalaris
MESCA004778
I
0.000
NEMVEDRAFT_v1g80927
Nematostella vectensis
NEMVEDRAFT_v1g80927
I
0.000
OESDEN_07489
Oesophagostomum dentatum
OESDEN_07489
I
0.000
Sakowv30044194m.g
Saccoglossus kowalevskii
Sakowv30044194m.g
I
0.000
SINV16571
Solenopsis invicta
SINV16571
I
0.000
Smp_000075
Schistosoma mansoni
Smp_000075
I
0.000
SPU_020565
Strongylocentrotus purpuratus
SPU_020565
I
0.000
SSLN_0000254701
Schistocephalus solidus
SSLN_0000254701
N
0.000
TASK_0000056701
Taenia asiatica
TASK_0000056701
N
0.000
tetur05g02800
Tetranychus urticae
tetur05g02800
I
0.000