CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_37644
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.contig_37644
T258107_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_37644.1
MADS box
20
67
KMENEAILQVTFSKHRSSLFKKASELCTLCRPDVGLIVFSPGNRAFCY
evm.TU.contig_37644.1
MADS box
106
127
EAARKRGKELKQRRKGLMKELW
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000008215
Anas platyrhynchos
ENSAPLG00000008215
N
Hoxd10
Dipodomys ordii
ENSDORG00000009436
N
ENSMEUG00000010280
Macropus eugenii
ENSMEUG00000010280
N
BARHL2
Tupaia belangeri
ENSTBEG00000002370
N
TLX1
Tupaia belangeri
ENSTBEG00000017384
N
ENSTTRG00000006446
Tursiops truncatus
ENSTTRG00000006446
N
HMX1
Tursiops truncatus
ENSTTRG00000013609
N
Tal_R001689
Tyto alba
Tal_R001689
N
Traes_4BL_BE3E058A6
Triticum aestivum
Traes_4BL_BE3E058A6
N