CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_38802
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.contig_38802
T258118_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_38802.1
MADS box
20
67
KMENEASLQVTFSKHRSSLFKKASELCTLCRPDVGLIIFSPGNRAFCY
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CH063_13189
Colletotrichum higginsianum
CH063_13189
N
0.000
e_gw1.7.202.1
Mycosphaerella graminicola
e_gw1.7.202.1
N
0.000
Mycgr3G44516
Zymoseptoria tritici
Mycgr3G44516
N
0.000
PVAR5_5086
Byssochlamys spectabilis
PVAR5_5086
N
0.000
U727_00434381321
Penicillium solitum
U727_00434381321
N
0.000