CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_40164
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.contig_40164
T258123_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_40164.1
MADS box
10
55
YINSDSIRKATFKKRKKGLMKKVSELNTLYDVKACAIIYNLYDSQL
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CANTEDRAFT_94621
Candida tenuis
CANTEDRAFT_94621
N
0.000
FFUJ_13903
Fusarium fujikuroi
FFUJ_13903
N
0.000
GNLVRS01_PISO0B12585g
Millerozyma farinosa
GNLVRS01_PISO0B12585g
N
0.000
MGG_13894
Magnaporthe oryzae
MGG_13894
N
0.000