CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_2684.2
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_2684.2
T258218_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_2684.2
MADS box
1
47
MENEASLQVTFSKHRSSLFKKASELCTLCRPDVGLIVFSPGNRAFCY
evm.model.supercontig_2684.2
MADS box
91
112
EAARKRGKELKQRRKGLMKELW
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIBMGA010197
Bombyx mori
BGIBMGA010197
N
CLEC009220
Cimex lectularius
CLEC009220
N
L798_08592
Zootermopsis nevadensis
L798_08592
N
LDEC015180
Leptinotarsa decemlineata
LDEC015180
N
PHUM574550
Pediculus humanus
PHUM574550
N
TC001451
Tribolium castaneum
TC001451
N
YQE_09103
Dendroctonus ponderosae
YQE_09103
N