CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_505.1
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_505.1
T258256_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_505.1
MADS box
1
47
MENEASLQVTFSKHRSSLFKKASELCTLCRPDVGLIVFSPGKRAIGY
evm.model.supercontig_505.1
MADS box
90
111
EAARKRGKELKQRRKGLMKELW
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI32574
Acyrthosiphon pisum
ACYPI32574
N
ACYPI40660
Acyrthosiphon pisum
ACYPI40660
N
ACYPI45243
Acyrthosiphon pisum
ACYPI45243
N