gene22916-v1.0-hybrid (Fragaria vesca)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 gene22916-v1.0-hybrid T258351_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna22916.1-v1.0-hybrid MADS box 10 58

Links

Other MADS box family TFs
Other Fragaria vesca TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010905 Ailuropoda melanoleuca ENSAMEG00000010905 N
ENSAMXG00000001564 Astyanax mexicanus ENSAMXG00000001564 N
ZNF703 Bos taurus ENSBTAG00000013943 N
ZNF703 Canis familiaris ENSCAFG00000006224 N
ZNF703 Callithrix jacchus ENSCJAG00000002785 N
ENSCSAG00000015685 Chlorocebus sabaeus ENSCSAG00000015685 N
ZNF703 Dasypus novemcinctus ENSDNOG00000034526 N
ENSDORG00000012028 Dipodomys ordii ENSDORG00000012028 N
ZNF703 Echinops telfairi ENSETEG00000016392 N
ZNF703 Homo sapiens ENSG00000183779 N
ZNF703 Gorilla gorilla ENSGGOG00000011795 N
ZNF703 Loxodonta africana ENSLAFG00000032676 N
ENSMEUG00000008055 Macropus eugenii ENSMEUG00000008055 N
ZNF703 Myotis lucifugus ENSMLUG00000011770 N
ZNF703 Macaca mulatta ENSMMUG00000001635 N
ZNF703 Monodelphis domestica ENSMODG00000010894 N
ENSMPUG00000010048 Mustela putorius furo ENSMPUG00000010048 N
Zfp703 Mus musculus ENSMUSG00000085795 N
ZNF703 Otolemur garnettii ENSOGAG00000029076 N
ENSONIG00000016178 Oreochromis niloticus ENSONIG00000016178 N
ENSORLG00000008664 Oryzias latipes ENSORLG00000008664 N
ENSPANG00000009528 Papio anubis ENSPANG00000009528 N
ZNF703 Procavia capensis ENSPCAG00000012052 N
ENSPFOG00000008404 Poecilia formosa ENSPFOG00000008404 N
ENSPPYG00000018508 Pongo abelii ENSPPYG00000018508 N
ZNF703 Pan troglodytes ENSPTRG00000020156 N
Zfp703 Rattus norvegicus ENSRNOG00000014199 N
ZNF703 Sus scrofa ENSSSCG00000015828 N
ENSSTOG00000005512 Ictidomys tridecemlineatus ENSSTOG00000005512 N
ENSTNIG00000013161 Tetraodon nigroviridis ENSTNIG00000013161 N
ENSTRUG00000014235 Takifugu rubripes ENSTRUG00000014235 N
ENSXMAG00000015479 Xiphophorus maculatus ENSXMAG00000015479 N