Pavir.J13519 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.J13519 T258950_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J13519.1.p MADS box 10 56

Links

Other MADS box family TFs
Other Panicum virgatum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_09560 Cladophialophora psammophila A1O5_09560 N
AUEXF2481DRAFT_234640 Aureobasidium subglaciale AUEXF2481DRAFT_234640 N
AUEXF2481DRAFT_701448 Aureobasidium subglaciale AUEXF2481DRAFT_701448 N
ACLA_074230 Aspergillus clavatus CADACLAG00006381 N
AFUA_2G15260 Aspergillus fumigatus CADAFUAG00004604 N
CADANGAG00007889 Aspergillus niger CADANGAG00007889 N
fgenesh1_pg.C_scaffold_6000355 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_6000355 N
G647_04386 Cladophialophora carrionii G647_04386 N
H072_136 Dactylellina haptotyla H072_136 N
M437DRAFT_60050 Aureobasidium melanogenum M437DRAFT_60050 N
M438DRAFT_363806 Aureobasidium pullulans M438DRAFT_363806 N
PMAA_001790 Penicillium marneffei PMAA_001790 N
PMAA_001790 Talaromyces marneffei PMAA_001790 N
PV04_08619 Capronia semiimmersa PV04_08619 N
PV06_00861 Exophiala oligosperma PV06_00861 N
PV06_02162 Exophiala oligosperma PV06_02162 N
PV07_06253 Cladophialophora immunda PV07_06253 N
PV08_00876 Exophiala spinifera PV08_00876 N
PV08_11467 Exophiala spinifera PV08_11467 N
PV09_07973 Verruconis gallopava PV09_07973 N
PV11_00794 Exophiala sideris PV11_00794 N
TSTA_099190 Talaromyces stipitatus TSTA_099190 N
Z518_02267 Rhinocladiella mackenziei Z518_02267 N
Z518_10253 Rhinocladiella mackenziei Z518_10253 N
Z519_01036 Cladophialophora bantiana Z519_01036 N
Z519_02061 Cladophialophora bantiana Z519_02061 N