CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J40610
(
Panicum virgatum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pavir.J40610
T258966_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J40610.1.p
MADS box
10
55
LIDEAGSRARTFKGRKKGLKKKAYELSVLCGVDVAVVCAGPGGGAP
Links
Other
MADS box
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Bb01471
Panicum virgatum
Pavir.Bb01471
N
0.778
Pavir.Ga00479
Panicum virgatum
Pavir.Ga00479
N
0.800
Pavir.J13519
Panicum virgatum
Pavir.J13519
N
0.809