Thhalv10002350m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10002350m.g T259097_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL80
M06994_2.00
Arabidopsis thaliana
TCACCA

TGGTGA
Dap-seq
OMalley et al.(2016)
FEM111_col_a
0.756 0.756
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002350m MADS box 10 55

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_007900 Aspergillus clavatus CADACLAG00000690 N
Pc16g10860 Penicillium chrysogenum Pc16g10860 N
PCH_Pc16g10860 Penicillium rubens PCH_Pc16g10860 N
S40288_04526 Stachybotrys chartarum S40288_04526 N
U727_00431181161 Penicillium solitum U727_00431181161 N