Thhalv10002996m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10002996m.g T259103_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002996m MADS box 10 54

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
4112_Multiple Saccharomyces mikatae 4112_Multiple I 0.000
4528_Multiple Saccharomyces bayanus 4528_Multiple I 0.000
4550_YDR216W Saccharomyces paradoxus 4550_YDR216W I 0.000
CAGL0E04884g Candida glabrata CAGL0E04884g N 0.000
Kpol_529p13 Vanderwaltozyma polyspora Kpol_529p13 N 0.000
LALA0_S04e05424g Lachancea lanzarotensis LALA0_S04e05424g N 0.000
NCAS_0B02840 Naumovozyma castellii NCAS_0B02840 N 0.000
NDAI_0C04860 Naumovozyma dairenensis NDAI_0C04860 I 0.000
SAKL0H12958g Lachancea kluyveri SAKL0H12958g N 0.000
Scas_Contig721.92 Saccharomyces castellii Scas_Contig721.92 N 0.000
SU7_2617 Saccharomyces arboricola SU7_2617 I 0.000
TBLA_0H00660 Tetrapisispora blattae TBLA_0H00660 N 0.000
TDEL_0F05500 Torulaspora delbrueckii TDEL_0F05500 N 0.000
TPHA_0C02160 Tetrapisispora phaffii TPHA_0C02160 N 0.000
ADR1 Saccharomyces cerevisiae YDR216W D 0.000
ZBAI_01684 Zygosaccharomyces bailii ZBAI_01684 N 0.000
ZBAI_09618 Zygosaccharomyces bailii ZBAI_09618 N 0.000
ZYRO0A09416g Zygosaccharomyces rouxii ZYRO0A09416g N 0.000