Thhalv10019451m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10019451m.g T259152_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.745 0.745
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10019451m MADS box 10 57

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006932 Aedes aegypti AAEL006932 I 0.000
Aan_R001546 Calypte anna Aan_R001546 I 0.000
Aan_R002198 Calypte anna Aan_R002198 I 0.000
Aan_R002199 Calypte anna Aan_R002199 I 0.000
Afo_R012706 Aptenodytes forsteri Afo_R012706 I 0.000
Alligator_sinensis_CCG010010.1 Alligator sinensis Alligator_sinensis_CCG010010.1 I 0.000
Alligator_sinensis_CCG011458.1 Alligator sinensis Alligator_sinensis_CCG011458.1 I 0.000
AMEC019970 Anopheles melas AMEC019970 I 0.000
Brh_R005153 Buceros rhinoceros Brh_R005153 I 0.000
Brh_R009368 Buceros rhinoceros Brh_R009368 I 0.000
Brh_R009982 Buceros rhinoceros Brh_R009982 I 0.000
CGI_10015578 Crassostrea gigas CGI_10015578 I 0.000
CPIJ013984 Culex quinquefasciatus CPIJ013984 I 0.000
CpipJ_CPIJ013984 Culex pipiens CpipJ_CPIJ013984 I 0.000
TFAP2B Anolis carolinensis ENSACAG00000005251 I 0.000
ENSACAG00000008801 Anolis carolinensis ENSACAG00000008801 I 0.000
ENSAMEG00000000718 Ailuropoda melanoleuca ENSAMEG00000000718 I 0.000
ENSAMEG00000002558 Ailuropoda melanoleuca ENSAMEG00000002558 I 0.000
ENSAMXG00000005947 Astyanax mexicanus ENSAMXG00000005947 I 0.000
ENSAMXG00000010345 Astyanax mexicanus ENSAMXG00000010345 I 0.000
ENSAPLG00000003702 Anas platyrhynchos ENSAPLG00000003702 I 0.000
ENSAPLG00000013905 Anas platyrhynchos ENSAPLG00000013905 I 0.000
ENSAPLG00000014639 Anas platyrhynchos ENSAPLG00000014639 I 0.000
TFAP2A Bos taurus ENSBTAG00000001250 I 0.000
ENSBTAP00000001651-D1 Bos grunniens ENSBTAP00000001651-D1 I 0.000
TFAP2A Canis familiaris ENSCAFG00000009658 I 0.000
TFAP2C Canis familiaris ENSCAFG00000011996 I 0.000
TFAP2A Choloepus hoffmanni ENSCHOG00000012060 I 0.000
ENSCING00000003722 Ciona intestinalis ENSCING00000003722 I 0.000
TFAP2E Callithrix jacchus ENSCJAG00000001531 I 0.000
TFAP2A Callithrix jacchus ENSCJAG00000021312 I 0.000
TFAP2A Cavia porcellus ENSCPOG00000000121 I 0.000
TFAP2C Cavia porcellus ENSCPOG00000023253 I 0.000
TFAP2E Cavia porcellus ENSCPOG00000024445 I 0.000
ENSCSAG00000001086 Chlorocebus sabaeus ENSCSAG00000001086 I 0.000
ENSCSAG00000007447 Chlorocebus sabaeus ENSCSAG00000007447 I 0.000
ENSCSAG00000015443 Chlorocebus sabaeus ENSCSAG00000015443 I 0.000
tfap2a Danio rerio ENSDARG00000059279 I 0.000
TFAP2E Dasypus novemcinctus ENSDNOG00000036871 I 0.000
TFAP2A Dasypus novemcinctus ENSDNOG00000045908 I 0.000
TFAP2A Equus caballus ENSECAG00000017468 I 0.000
TFAP2C Equus caballus ENSECAG00000021125 I 0.000
TFAP2A Echinops telfairi ENSETEG00000017102 I 0.000
ENSFALG00000012770 Ficedula albicollis ENSFALG00000012770 I 0.000
ENSFALG00000012772 Ficedula albicollis ENSFALG00000012772 I 0.000
ENSFALG00000013306 Ficedula albicollis ENSFALG00000013306 I 0.000
TFAP2C Felis catus ENSFCAG00000005551 I 0.000
TFAP2C Homo sapiens ENSG00000087510 D 0.000
TFAP2E Homo sapiens ENSG00000116819 D 0.000
TFAP2A Homo sapiens ENSG00000137203 D 0.000
tfap2a Gasterosteus aculeatus ENSGACG00000002334 I 0.000
tfap2c Gasterosteus aculeatus ENSGACG00000005944 I 0.000
tfap2b Gasterosteus aculeatus ENSGACG00000007277 I 0.000
TFAP2A Gallus gallus ENSGALG00000012775 I 0.000
TFAP2B Gallus gallus ENSGALG00000016680 I 0.000
TFAP2D Gallus gallus ENSGALG00000019842 I 0.000
TFAP2C Gorilla gorilla ENSGGOG00000000420 I 0.000
TFAP2A Gorilla gorilla ENSGGOG00000007542 I 0.000
TFAP2E Gorilla gorilla ENSGGOG00000009762 I 0.000
ENSGMOG00000000705 Gadus morhua ENSGMOG00000000705 I 0.000
ENSGMOG00000013321 Gadus morhua ENSGMOG00000013321 I 0.000
ENSGMOG00000017800 Gadus morhua ENSGMOG00000017800 I 0.000
ENSLACG00000003315 Latimeria chalumnae ENSLACG00000003315 I 0.000
ENSLACG00000007917 Latimeria chalumnae ENSLACG00000007917 I 0.000
ENSLACG00000016799 Latimeria chalumnae ENSLACG00000016799 I 0.000
TFAP2A Loxodonta africana ENSLAFG00000011386 I 0.000
TFAP2B Loxodonta africana ENSLAFG00000027209 I 0.000
TFAP2E Loxodonta africana ENSLAFG00000029444 I 0.000
ENSLOCG00000006963 Lepisosteus oculatus ENSLOCG00000006963 I 0.000
ENSLOCG00000013190 Lepisosteus oculatus ENSLOCG00000013190 I 0.000
ENSLOCG00000016336 Lepisosteus oculatus ENSLOCG00000016336 I 0.000
ENSLOCG00000016338 Lepisosteus oculatus ENSLOCG00000016338 I 0.000
ENSMGAG00000014245 Meleagris gallopavo ENSMGAG00000014245 I 0.000
ENSMGAG00000014248 Meleagris gallopavo ENSMGAG00000014248 I 0.000
ENSMGAG00000016768 Meleagris gallopavo ENSMGAG00000016768 I 0.000
ENSMICG00000005131 Microcebus murinus ENSMICG00000005131 I 0.000
TFAP2B Microcebus murinus ENSMICG00000017317 I 0.000
TFAP2A Myotis lucifugus ENSMLUG00000011477 I 0.000
TFAP2A Macaca mulatta ENSMMUG00000006186 I 0.000
TFAP2C Macaca mulatta ENSMMUG00000009364 I 0.000
ENSMMUP00000008137 Macaca fascicularis ENSMMUP00000008137 I 0.000
TFAP2A Monodelphis domestica ENSMODG00000010299 I 0.000
TFAP2C Monodelphis domestica ENSMODG00000016445 I 0.000
ENSMPUG00000000601 Mustela putorius furo ENSMPUG00000000601 I 0.000
ENSMPUG00000014894 Mustela putorius furo ENSMPUG00000014894 I 0.000
Tfap2a Mus musculus ENSMUSG00000021359 D 0.000
ENSNLEG00000000503 Nomascus leucogenys ENSNLEG00000000503 I 0.000
ENSNLEG00000003972 Nomascus leucogenys ENSNLEG00000003972 I 0.000
ENSNLEG00000007042 Nomascus leucogenys ENSNLEG00000007042 I 0.000
TFAP2A Ornithorhynchus anatinus ENSOANG00000007183 I 0.000
TFAP2C Ornithorhynchus anatinus ENSOANG00000009253 I 0.000
ENSOARG00000016395 Ovis aries ENSOARG00000016395 I 0.000
ENSOARG00000019518 Ovis aries ENSOARG00000019518 I 0.000
TFAP2A Oryctolagus cuniculus ENSOCUG00000005315 I 0.000
TFAP2C Oryctolagus cuniculus ENSOCUG00000010996 I 0.000
TFAP2A Otolemur garnettii ENSOGAG00000003629 I 0.000
ENSOGAG00000033901 Otolemur garnettii ENSOGAG00000033901 I 0.000
ENSONIG00000006816 Oreochromis niloticus ENSONIG00000006816 I 0.000
ENSONIG00000014538 Oreochromis niloticus ENSONIG00000014538 I 0.000
TFAP2A Ochotona princeps ENSOPRG00000014292 I 0.000
tfap2c Oryzias latipes ENSORLG00000006158 I 0.000
tfap2a Oryzias latipes ENSORLG00000006633 I 0.000
ENSP00000201031 Macaca fascicularis ENSP00000201031 I 0.000
ENSPANG00000022354 Papio anubis ENSPANG00000022354 I 0.000
ENSPANG00000024505 Papio anubis ENSPANG00000024505 I 0.000
ENSPFOG00000001600 Poecilia formosa ENSPFOG00000001600 I 0.000
ENSPFOG00000015812 Poecilia formosa ENSPFOG00000015812 I 0.000
ENSPFOG00000015857 Poecilia formosa ENSPFOG00000015857 I 0.000
ENSPFOG00000016070 Poecilia formosa ENSPFOG00000016070 I 0.000
ENSPMAG00000002994 Petromyzon marinus ENSPMAG00000002994 I 0.000
ENSPPYG00000001556 Pongo abelii ENSPPYG00000001556 I 0.000
ENSPPYG00000011156 Pongo abelii ENSPPYG00000011156 I 0.000
ENSPPYG00000016218 Pongo abelii ENSPPYG00000016218 I 0.000
ENSPSIG00000005093 Pelodiscus sinensis ENSPSIG00000005093 I 0.000
ENSPSIG00000010979 Pelodiscus sinensis ENSPSIG00000010979 I 0.000
TFAP2E Pan troglodytes ENSPTRG00000000523 I 0.000
TFAP2C Pan troglodytes ENSPTRG00000013654 I 0.000
TFAP2A Pan troglodytes ENSPTRG00000017714 I 0.000
TFAP2A Pteropus vampyrus ENSPVAG00000000240 I 0.000
TFAP2C Pteropus vampyrus ENSPVAG00000015403 I 0.000
Tfap2c Rattus norvegicus ENSRNOG00000005246 I 0.000
Tfap2a Rattus norvegicus ENSRNOG00000015522 I 0.000
ENSSHAG00000004162 Sarcophilus harrisii ENSSHAG00000004162 I 0.000
ENSSHAG00000011591 Sarcophilus harrisii ENSSHAG00000011591 I 0.000
TFAP2A Sus scrofa ENSSSCG00000001036 I 0.000
TFAP2C Sus scrofa ENSSSCG00000007499 I 0.000
ENSSTOG00000001781 Ictidomys tridecemlineatus ENSSTOG00000001781 I 0.000
ENSSTOG00000019865 Ictidomys tridecemlineatus ENSSTOG00000019865 I 0.000
ENSTGUG00000005713 Taeniopygia guttata ENSTGUG00000005713 I 0.000
TFAP2D Taeniopygia guttata ENSTGUG00000013264 I 0.000
TFAP2B Taeniopygia guttata ENSTGUG00000013267 I 0.000
tfap2d Tetraodon nigroviridis ENSTNIG00000003995 I 0.000
tfap2a Tetraodon nigroviridis ENSTNIG00000005737 I 0.000
tfap2b Tetraodon nigroviridis ENSTNIG00000014239 I 0.000
tfap2d Takifugu rubripes ENSTRUG00000000856 I 0.000
tfap2a Takifugu rubripes ENSTRUG00000005798 I 0.000
ENSTSYG00000003193 Tarsius syrichta ENSTSYG00000003193 I 0.000
ENSXMAG00000005803 Xiphophorus maculatus ENSXMAG00000005803 I 0.000
ENSXMAG00000006210 Xiphophorus maculatus ENSXMAG00000006210 I 0.000
ENSXMAG00000006217 Xiphophorus maculatus ENSXMAG00000006217 I 0.000
ENSXMAG00000012878 Xiphophorus maculatus ENSXMAG00000012878 I 0.000
GB50795 Apis mellifera GB50795 I 0.000
Gfo_R000727 Geospiza fortis Gfo_R000727 I 0.000
Gfo_R000728 Geospiza fortis Gfo_R000728 I 0.000
Gfo_R006498 Geospiza fortis Gfo_R006498 I 0.000
L798_10151 Zootermopsis nevadensis L798_10151 I 0.000
Myotis_brandtii_Tfap2a_10010543 Myotis brandtii Myotis_brandtii_Tfap2a_10010543 I 0.000
NV15391 Nasonia vitripennis NV15391 I 0.000
Ogr07365 Ophisaurus gracilis Ogr07365 I 0.000
Ogr12936 Ophisaurus gracilis Ogr12936 I 0.000
Pvit_00888 Pogona vitticeps Pvit_00888 I 0.000
Pvit_11230 Pogona vitticeps Pvit_11230 I 0.000
SINV20015 Solenopsis invicta SINV20015 I 0.000
Sjc_0121700 Schistosoma japonicum Sjc_0121700 I 0.000
SPU_016685 Strongylocentrotus purpuratus SPU_016685 I 0.000
Tal_R008010 Tyto alba Tal_R008010 I 0.000
tfap2b.L Xenopus laevis XB-GENE-1188127 I 0.000
tfap2a Xenopus tropicalis XB-GENE-481201 I 0.000
tfap2b Xenopus tropicalis XB-GENE-485026 I 0.000
tfap2a.L Xenopus laevis XB-GENE-6254445 I 0.000
tfap2a.S Xenopus laevis XB-GENE-865453 I 0.000
tfap2c.S Xenopus laevis XB-GENE-865803 I 0.000
tfap2e Xenopus tropicalis XB-GENE-876803 I 0.000
tfap2e.L Xenopus laevis XB-GENE-876809 I 0.000
yakG031910 Bos grunniens yakG031910 I 0.000