Thhalv10027038m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10027038m.g T259193_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.886 0.886
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10027038m MADS box 1 36

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_05935 Capronia epimyces A1O3_05935 N 0.000
BBA_07300 Beauveria bassiana BBA_07300 N 0.000
CSUB01_08112 Colletotrichum sublineola CSUB01_08112 N 0.000
estExt_fgenesh1_pm.C_sca_2_chr3_3_00095 Nectria haematococca estExt_fgenesh1_pm.C_sca_2_chr3_3_00095 N 0.000
JL09_g602 Pichia kudriavzevii JL09_g602 N 0.000
KUCA_T00003601001 Kuraishia capsulata KUCA_T00003601001 N 0.000
LELG_03488 Lodderomyces elongisporus LELG_03488 N 0.000
MAC_02193 Metarhizium acridum MAC_02193 N 0.000
MAJ_11102 Metarhizium majus MAJ_11102 N 0.000
MANI_018477 Metarhizium anisopliae MANI_018477 N 0.000
MBR_09190 Metarhizium brunneum MBR_09190 N 0.000
MGU_10142 Metarhizium guizhouense MGU_10142 N 0.000
NechaG103670 Fusarium solani NechaG103670 N 0.000
UV8b_4982 Ustilaginoidea virens UV8b_4982 N 0.000
V499_06674 Pseudogymnoascus pannorum V499_06674 N 0.000
VHEMI08314 Torrubiella hemipterigena VHEMI08314 N 0.000