AFAF006302 (Anopheles farauti)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 AFAF006302 T259489_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		0.957 0.957
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		0.957 0.957
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.913 0.913
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.913 0.913
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.913 0.913
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.913 0.913
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.913 0.913
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.913 0.913
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.913 0.913
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.913 0.913
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.913 0.913
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.913 0.913
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.913 0.913
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.913 0.913
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.913 0.913
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.913 0.913
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.913 0.913
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.913 0.913
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.913 0.913
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.913 0.913
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.913 0.913
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.913 0.913
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.913 0.913
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.913 0.913
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.913 0.913
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFAF006302-PA MADS box 151 173

Links

Other MADS box family TFs
Other Anopheles farauti TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009700 Calypte anna Aan_R009700 I 0.000
Afo_R014821 Aptenodytes forsteri Afo_R014821 I 0.000
Alligator_sinensis_CCG001947.1 Alligator sinensis Alligator_sinensis_CCG001947.1 I 0.000
Brh_R011452 Buceros rhinoceros Brh_R011452 I 0.000
Cmyd_10007876 Chelonia mydas Cmyd_10007876 I 0.000
ZBTB2 Anolis carolinensis ENSACAG00000006317 I 0.000
ENSAMEG00000011098 Ailuropoda melanoleuca ENSAMEG00000011098 I 0.000
ENSAMXG00000006249 Astyanax mexicanus ENSAMXG00000006249 I 0.000
ENSAPLG00000011819 Anas platyrhynchos ENSAPLG00000011819 I 0.000
ZBTB2 Bos taurus ENSBTAG00000014790 I 0.000
ZBTB2 Canis familiaris ENSCAFG00000000422 I 0.000
ZBTB2 Callithrix jacchus ENSCJAG00000013393 I 0.000
ENSCPOG00000002040 Cavia porcellus ENSCPOG00000002040 I 0.000
ENSCSAG00000014259 Chlorocebus sabaeus ENSCSAG00000014259 I 0.000
zbtb2b Danio rerio ENSDARG00000028086 I 0.000
ZBTB2 Dasypus novemcinctus ENSDNOG00000047729 I 0.000
Zbtb2 Dipodomys ordii ENSDORG00000013305 I 0.000
ZBTB2 Equus caballus ENSECAG00000021762 I 0.000
ENSFALG00000012253 Ficedula albicollis ENSFALG00000012253 I 0.000
ZBTB2 Felis catus ENSFCAG00000022354 I 0.000
ZBTB2 Homo sapiens ENSG00000181472 D 0.000
zbtb2b Gasterosteus aculeatus ENSGACG00000008691 I 0.000
ZBTB2 Gallus gallus ENSGALG00000012966 I 0.000
ZBTB2 Gorilla gorilla ENSGGOG00000010529 I 0.000
ENSGMOG00000007509 Gadus morhua ENSGMOG00000007509 I 0.000
ZBTB2 Loxodonta africana ENSLAFG00000001805 I 0.000
ENSLOCG00000016295 Lepisosteus oculatus ENSLOCG00000016295 I 0.000
ENSMEUG00000012838 Macropus eugenii ENSMEUG00000012838 I 0.000
ZBTB2 Meleagris gallopavo ENSMGAG00000012677 I 0.000
ENSMICG00000010578 Microcebus murinus ENSMICG00000010578 I 0.000
ZBTB2 Myotis lucifugus ENSMLUG00000001314 I 0.000
ZBTB2 Macaca mulatta ENSMMUG00000029475 I 0.000
ZBTB2 Monodelphis domestica ENSMODG00000016757 I 0.000
ENSMPUG00000010444 Mustela putorius furo ENSMPUG00000010444 I 0.000
Zbtb2 Mus musculus ENSMUSG00000075327 I 0.000
ENSNLEG00000015384 Nomascus leucogenys ENSNLEG00000015384 I 0.000
ZBTB2 Ornithorhynchus anatinus ENSOANG00000003326 I 0.000
ENSOARG00000003148 Ovis aries ENSOARG00000003148 I 0.000
ZBTB2 Oryctolagus cuniculus ENSOCUG00000022931 I 0.000
ZBTB2 Otolemur garnettii ENSOGAG00000005262 I 0.000
ENSONIG00000013371 Oreochromis niloticus ENSONIG00000013371 I 0.000
ENSP00000323183 Macaca fascicularis ENSP00000323183 I 0.000
ENSP00000323183-D1 Bos grunniens ENSP00000323183-D1 I 0.000
ZBTB2 Procavia capensis ENSPCAG00000013849 I 0.000
ENSPSIG00000018246 Pelodiscus sinensis ENSPSIG00000018246 I 0.000
ZBTB2 Pan troglodytes ENSPTRG00000018712 I 0.000
Zbtb2 Rattus norvegicus ENSRNOG00000019544 I 0.000
ENSSHAG00000013043 Sarcophilus harrisii ENSSHAG00000013043 I 0.000
ZBTB2 Sus scrofa ENSSSCG00000004090 I 0.000
ENSSTOG00000021611 Ictidomys tridecemlineatus ENSSTOG00000021611 I 0.000
ZBTB2 Taeniopygia guttata ENSTGUG00000011276 I 0.000
zbtb2b Tetraodon nigroviridis ENSTNIG00000012263 I 0.000
zbtb2b Takifugu rubripes ENSTRUG00000018234 I 0.000
ENSTSYG00000000113 Tarsius syrichta ENSTSYG00000000113 I 0.000
ZBTB2 Tursiops truncatus ENSTTRG00000014190 I 0.000
Gfo_R006405 Geospiza fortis Gfo_R006405 I 0.000
Myotis_brandtii_ZBTB2_10021316 Myotis brandtii Myotis_brandtii_ZBTB2_10021316 I 0.000
Ogr17347 Ophisaurus gracilis Ogr17347 I 0.000
Pvit_17227 Pogona vitticeps Pvit_17227 I 0.000
Tal_R001183 Tyto alba Tal_R001183 I 0.000
zbtb2.L Xenopus laevis XB-GENE-6255749 I 0.000
zbtb2 Xenopus tropicalis XB-GENE-977864 I 0.000