AFUN006149 (Anopheles funestus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 AFUN006149 T259494_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		1.000 1.000
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		1.000 1.000
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.955 0.955
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.955 0.955
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.955 0.955
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.955 0.955
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.955 0.955
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.955 0.955
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.955 0.955
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.955 0.955
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.955 0.955
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.955 0.955
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.955 0.955
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.955 0.955
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.955 0.955
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.955 0.955
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.955 0.955
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.955 0.955
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.955 0.955
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.955 0.955
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.955 0.955
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.955 0.955
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.955 0.955
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.955 0.955
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.955 0.955
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.727 0.727
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.727 0.727
ARG80
M08426_2.00 		Saccharomyces cerevisiae
WGACDC
GHGTCW		 ChIP-chip
Mathelier et al.(2014)
MA0271.1 		0.727 0.727
ARG80
M08588_2.00 		Saccharomyces cerevisiae
NNDVCBNVBDNGRHAR
YTDYCNHVBNVGBHNN		 Misc
DeBoer et al.(2011)
YMR042W_1483 		0.727 0.727
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.727 0.727
ARG80
M10989_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRI_01 		0.727 0.727
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.727 0.727
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.727 0.727
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.727 0.727
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFUN006149-PA MADS box 150 171

Links

Other MADS box family TFs
Other Anopheles funestus TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE014785 Anopheles atroparvus AATE014785 I 0.000
ADIR005096 Anopheles dirus ADIR005096 I 0.000
AEPI009051 Anopheles epiroticus AEPI009051 I 0.000
AFAF016726 Anopheles farauti AFAF016726 I 0.000
Afo_R007655 Aptenodytes forsteri Afo_R007655 I 0.000
AFUN000829 Anopheles funestus AFUN000829 I 0.000
Alligator_sinensis_CCG020663.1 Alligator sinensis Alligator_sinensis_CCG020663.1 I 0.000
AMEC017008 Anopheles melas AMEC017008 I 0.000
AQUA011339 Anopheles quadriannulatus AQUA011339 I 0.000
A_03374 Schistosoma haematobium A_03374 I 0.000
BGIBMGA003472 Bombyx mori BGIBMGA003472 I 0.000
BGLB009342 Biomphalaria glabrata BGLB009342 I 0.000
CLEC002917 Cimex lectularius CLEC002917 I 0.000
CLEC012864 Cimex lectularius CLEC012864 I 0.000
Cmyd_10007604 Chelonia mydas Cmyd_10007604 I 0.000
D915_11353 Fasciola hepatica D915_11353 I 0.000
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I 0.000
ECANG7_07095 Echinococcus canadensis ECANG7_07095 I 0.000
ECPE_0000540401 Echinostoma caproni ECPE_0000540401 I 0.000
ARNT Anolis carolinensis ENSACAG00000011254 I 0.000
ENSAMEG00000001200 Ailuropoda melanoleuca ENSAMEG00000001200 I 0.000
ENSAPLG00000013397 Anas platyrhynchos ENSAPLG00000013397 I 0.000
ARNT Bos taurus ENSBTAG00000021037 I 0.000
ENSBTAP00000028023-D1 Bos grunniens ENSBTAP00000028023-D1 I 0.000
ARNT Canis familiaris ENSCAFG00000012149 I 0.000
ARNT Choloepus hoffmanni ENSCHOG00000010045 I 0.000
arnt Ciona intestinalis ENSCING00000008102 I 0.000
ARNT Callithrix jacchus ENSCJAG00000006839 I 0.000
ARNT Cavia porcellus ENSCPOG00000014578 I 0.000
ENSCSAG00000018038 Chlorocebus sabaeus ENSCSAG00000018038 I 0.000
ARNT Dasypus novemcinctus ENSDNOG00000005093 I 0.000
ENSDORG00000014121 Dipodomys ordii ENSDORG00000014121 I 0.000
ARNT Equus caballus ENSECAG00000009602 I 0.000
ARNT Erinaceus europaeus ENSEEUG00000007500 I 0.000
ARNT Echinops telfairi ENSETEG00000001280 I 0.000
ARNT Felis catus ENSFCAG00000003644 I 0.000
ARNT Homo sapiens ENSG00000143437 D 0.000
arnt Gasterosteus aculeatus ENSGACG00000011686 I 0.000
ARNT Gallus gallus ENSGALG00000000751 I 0.000
ARNT Gorilla gorilla ENSGGOG00000015383 I 0.000
ENSGMOG00000006058 Gadus morhua ENSGMOG00000006058 I 0.000
ARNT Loxodonta africana ENSLAFG00000011282 I 0.000
ENSMEUG00000003050 Macropus eugenii ENSMEUG00000003050 I 0.000
ARNT Meleagris gallopavo ENSMGAG00000000943 I 0.000
ARNT Microcebus murinus ENSMICG00000005872 I 0.000
ARNT Myotis lucifugus ENSMLUG00000003502 I 0.000
ARNT Macaca mulatta ENSMMUG00000000541 I 0.000
ARNT Monodelphis domestica ENSMODG00000018814 I 0.000
ENSMPUG00000004365 Mustela putorius furo ENSMPUG00000004365 I 0.000
Arnt Mus musculus ENSMUSG00000015522 D 0.000
ENSNLEG00000009971 Nomascus leucogenys ENSNLEG00000009971 I 0.000
ARNT Ornithorhynchus anatinus ENSOANG00000004580 I 0.000
ENSOARG00000020870 Ovis aries ENSOARG00000020870 I 0.000
ARNT Oryctolagus cuniculus ENSOCUG00000013582 I 0.000
ARNT Otolemur garnettii ENSOGAG00000004523 I 0.000
ENSONIG00000006431 Oreochromis niloticus ENSONIG00000006431 I 0.000
ARNT Ochotona princeps ENSOPRG00000010374 I 0.000
ARNT Oryzias latipes ENSORLG00000010551 I 0.000
ENSP00000351407 Macaca fascicularis ENSP00000351407 I 0.000
ENSPANG00000016773 Papio anubis ENSPANG00000016773 I 0.000
ARNT Procavia capensis ENSPCAG00000008485 I 0.000
ENSPPYG00000000888 Pongo abelii ENSPPYG00000000888 I 0.000
ENSPSIG00000008480 Pelodiscus sinensis ENSPSIG00000008480 I 0.000
ARNT Pan troglodytes ENSPTRG00000001266 I 0.000
ARNT Pteropus vampyrus ENSPVAG00000004354 I 0.000
Arnt Rattus norvegicus ENSRNOG00000031174 I 0.000
ARNT Sorex araneus ENSSARG00000005490 I 0.000
ENSSHAG00000012227 Sarcophilus harrisii ENSSHAG00000012227 I 0.000
ARNT Sus scrofa ENSSSCG00000006646 I 0.000
ENSSTOG00000013876 Ictidomys tridecemlineatus ENSSTOG00000013876 I 0.000
ARNT Taeniopygia guttata ENSTGUG00000004647 I 0.000
ARNT Tetraodon nigroviridis ENSTNIG00000008064 I 0.000
ARNT Takifugu rubripes ENSTRUG00000014504 I 0.000
ENSTSYG00000006074 Tarsius syrichta ENSTSYG00000006074 I 0.000
ARNT Tursiops truncatus ENSTTRG00000007388 I 0.000
ARNT Vicugna pacos ENSVPAG00000005439 I 0.000
estExt_fgenesh2_pg.C_1460068 Branchiostoma floridae estExt_fgenesh2_pg.C_1460068 I 0.000
GA11313 Drosophila pseudoobscura FBgn0071367 I 0.000
GF18433 Drosophila ananassae FBgn0095451 I 0.000
GG17399 Drosophila erecta FBgn0109625 I 0.000
GH18221 Drosophila grimshawi FBgn0125689 I 0.000
GI10175 Drosophila mojavensis FBgn0132941 I 0.000
GL12493 Drosophila persimilis FBgn0150099 I 0.000
GM26289 Drosophila sechellia FBgn0181143 I 0.000
GD20825 Drosophila simulans FBgn0192287 I 0.000
GJ10876 Drosophila virilis FBgn0198144 I 0.000
GK11420 Drosophila willistoni FBgn0213431 I 0.000
GE24803 Drosophila yakuba FBgn0241904 I 0.000
tgo Drosophila melanogaster FBgn0264075 D 0.000
Gfo_R011690 Geospiza fortis Gfo_R011690 I 0.000
HHAL008564-PA Halyomorpha halys HHAL008564-PA I 0.000
HHAL009348-PA Halyomorpha halys HHAL009348-PA I 0.000
HMEL013329 Heliconius melpomene HMEL013329 I 0.000
ISCW023999 Ixodes scapularis ISCW023999 I 0.000
KGM_04621 Danaus plexippus KGM_04621 I 0.000
LCUP007387 Lucilia cuprina LCUP007387 I 0.000
LDEC004670 Leptinotarsa decemlineata LDEC004670 I 0.000
LLOJ003291 Lutzomyia longipalpis LLOJ003291 I 0.000
MCINX011636 Melitaea cinxia MCINX011636 I 0.000
MCOS_0000389001 Mesocestoides corti MCOS_0000389001 I 0.000
MDOA015409 Musca domestica MDOA015409 I 0.000
Myotis_brandtii_ARNT_10031836 Myotis brandtii Myotis_brandtii_ARNT_10031836 I 0.000
NV11924 Nasonia vitripennis NV11924 I 0.000
Ocbimv22015061m.g Octopus bimaculoides Ocbimv22015061m.g I 0.000
PHUM505970 Pediculus humanus PHUM505970 I 0.000
Pvit_04978 Pogona vitticeps Pvit_04978 I 0.000
PXEA_0001988401 Protopolystoma xenopodis PXEA_0001988401 I 0.000
RPRC004351 Rhodnius prolixus RPRC004351 I 0.000
RSKR_0000723700 Rhabditophanes kr3021 RSKR_0000723700 N 0.000
Sakowv30011795m.g Saccoglossus kowalevskii Sakowv30011795m.g I 0.000
SINV17691 Solenopsis invicta SINV17691 I 0.000
Smp_123420 Schistosoma mansoni Smp_123420 I 0.000
SMTD_0000012501 Schistosoma mattheei SMTD_0000012501 I 0.000
SMU15010696 Schmidtea mediterranea SMU15010696 I 0.000
Tal_R007034 Tyto alba Tal_R007034 I 0.000
TC004710 Tribolium castaneum TC004710 I 0.000
tetur01g08330 Tetranychus urticae tetur01g08330 I 0.000
TRE_0001250901 Trichobilharzia regenti TRE_0001250901 I 0.000
arnt.L Xenopus laevis XB-GENE-17346408 I 0.000
arnt Xenopus tropicalis XB-GENE-855450 I 0.000
arnt.S Xenopus laevis XB-GENE-866594 I 0.000