MECP2 (Cavia porcellus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSCPOG00000012579 T260090_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecp2
M00806_2.00 		Mus musculus
NNNNNHAHNN
NNDTDNNNNN		 PBM
Weirauch et al.(2013)
pTH3054 		1.000 1.000
MECP2
M09257_2.00 		Homo sapiens
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C 		1.000 1.000
Mecp2
M09259_2.00 		Mus musculus
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C 		1.000 1.000
MECP2
M11032_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_01 		1.000 1.000
MECP2
M11033_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_02 		1.000 1.000
MECP2
M11034_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4_01 		1.000 1.000
MECP2
M11035_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000011316 MBD 90 161

Links

Other MBD family TFs
Other Cavia porcellus TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_00627 Phytophthora parasitica F443_00627 N
maker-pag1_scaffold_64-snap-gene-0.36 Pythium aphanidermatum maker-pag1_scaffold_64-snap-gene-0.36 N
maker-par_contig_10149-snap-gene-0.0 Pythium arrhenomanes maker-par_contig_10149-snap-gene-0.0 N
maker-pir_contig_493-snap-gene-0.11 Pythium irregulare maker-pir_contig_493-snap-gene-0.11 N
maker-pve_contig_397-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_397-fgenesh-gene-0.0 N
Phyra85498 Phytophthora ramorum Phyra85498 N
Physo138283 Phytophthora sojae Physo138283 N
PYU1_G002992 Pythium ultimum PYU1_G002992 N
snap_masked-pve_contig_397-abinit-gene-0.26 Pythium vexans snap_masked-pve_contig_397-abinit-gene-0.26 N