ENSLACG00000011281 (Latimeria chalumnae)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSLACG00000011281 T260199_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecp2
M00806_2.00 		Mus musculus
NNNNNHAHNN
NNDTDNNNNN		 PBM
Weirauch et al.(2013)
pTH3054 		0.868 0.868
MECP2
M09257_2.00 		Homo sapiens
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C 		0.958 0.958
Mecp2
M09259_2.00 		Mus musculus
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C 		0.958 0.958
MECP2
M11032_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_01 		0.974 0.974
MECP2
M11033_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_02 		0.974 0.974
MECP2
M11034_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4_01 		0.974 0.974
MECP2
M11035_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4 		0.974 0.974
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000012808 MBD 89 160
ENSLACP00000012809 MBD 79 117
ENSLACP00000012810 MBD 1 38

Links

Other MBD family TFs
Other Latimeria chalumnae TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_221018 Agaricus bisporus AGABI2DRAFT_221018 I
AMAG_10934 Allomyces macrogynus AMAG_10934 I
AMAG_11531 Allomyces macrogynus AMAG_11531 I
BN946_scf184656.g9 Trametes cinnabarina BN946_scf184656.g9 I
CC1G_03210 Coprinopsis cinerea CC1G_03210 I
CERSUDRAFT_154783 Ceriporiopsis subvermispora CERSUDRAFT_154783 I
CY34DRAFT_590075 Suillus luteus CY34DRAFT_590075 I
estExt_fgeneshMC_kg.C_60018 Mucor circinelloides estExt_fgeneshMC_kg.C_60018 I
fgeneshMC_pm.9_#_186 Mucor circinelloides fgeneshMC_pm.9_#_186 I
fgeneshPB_pg.22__185 Phycomyces blakesleeanus fgeneshPB_pg.22__185 I
fgeneshPB_pg.2__402 Phycomyces blakesleeanus fgeneshPB_pg.2__402 I
GALMADRAFT_535775 Galerina marginata GALMADRAFT_535775 I
GLOINDRAFT_38994 Rhizophagus irregularis GLOINDRAFT_38994 I
GLOTRDRAFT_137651 Gloeophyllum trabeum GLOTRDRAFT_137651 N
gw1.3.368.1 Heterobasidion annosum gw1.3.368.1 I
HETIRDRAFT_245864 Heterobasidion irregulare HETIRDRAFT_245864 I
JAAARDRAFT_35522 Jaapia argillacea JAAARDRAFT_35522 N
K443DRAFT_671242 Laccaria amethystina K443DRAFT_671242 I
LACBIDRAFT_399488 Laccaria bicolor LACBIDRAFT_399488 I
M378DRAFT_10526 Amanita muscaria M378DRAFT_10526 I
M413DRAFT_24478 Hebeloma cylindrosporum M413DRAFT_24478 I
MELLADRAFT_118331 Melampsora laricipopulina MELLADRAFT_118331 I
PaG_02922 Pseudozyma aphidis PaG_02922 I
PAXRUDRAFT_830673 Paxillus rubicundulus PAXRUDRAFT_830673 I
PFL1_03021 Pseudozyma flocculosa PFL1_03021 I
PGTG_09159 Puccinia graminis PGTG_09159 D
PHACADRAFT_258404 Phanerochaete carnosa PHACADRAFT_258404 I
PHLGIDRAFT_76307 Phlebiopsis gigantea PHLGIDRAFT_76307 I
PHSY_000207 Pseudozyma hubeiensis PHSY_000207 I
PIIN_00063 Piriformospora indica PIIN_00063 N
PILCRDRAFT_94123 Piloderma croceum PILCRDRAFT_94123 I
PLEOSDRAFT_1083727 Pleurotus ostreatus PLEOSDRAFT_1083727 I
POSPLDRAFT_113058 Postia placenta POSPLDRAFT_113058 I
PTTG_02951 Puccinia triticina PTTG_02951 I
RO3G_08081 Rhizopus oryzae RO3G_08081 I
SCHCODRAFT_257622 Schizophyllum commune SCHCODRAFT_257622 I
SERLA73DRAFT_72478 Serpula lacrymans SERLA73DRAFT_72478 I
SPPG_09179 Spizellomyces punctatus SPPG_09179 I
sr10662 Sporisorium reilianum sr10662 I
UHOR_02856 Ustilago hordei UHOR_02856 N
UM01925 Ustilago maydis UM01925 I
V565_004710 Rhizoctonia solani V565_004710 I