CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MBD7
(
Arabidopsis lyrata
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
fgenesh2_kg.8__1931__AT5G59800.1
T260575_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.8__1931__AT5G59800.1
MBD
21
96
IADPTSFCGKILPGWTVVNRPRSSRNGSVDTYFIEPGTGRQFSSLEAIHRHLAREVNDRRLTRAASFFQERTRVYE
fgenesh2_kg.8__1931__AT5G59800.1
MBD
111
174
YASKGFRLPRGWSVEEVPRKNSHYIDKYYVERKTGKRFRSLVSVERYLRESGNRTDQQLILLQN
fgenesh2_kg.8__1931__AT5G59800.1
MBD
174
247
NRRGHSKDFSLPDGWIVEEKPRRNSSHIDRSYIEPGTGNKFRSMAAVERYLQAVENSTVDMVHSERLALLMNRS
Links
Other
MBD
family TFs
Other
Arabidopsis lyrata
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mod(mdg4)
Drosophila melanogaster
FBgn0002781
N
GF19963
Drosophila ananassae
FBgn0096970
N
GG14638
Drosophila erecta
FBgn0106894
N
GI16938
Drosophila mojavensis
FBgn0139684
N
GL20574
Drosophila persimilis
FBgn0158169
N
GM11021
Drosophila sechellia
FBgn0165966
N
GJ14429
Drosophila virilis
FBgn0201640
N
GK18931
Drosophila willistoni
FBgn0220929
N
GE24991
Drosophila yakuba
FBgn0242084
N
GA30094
Drosophila pseudoobscura
FBgn0262046
N
pre-mod(mdg4)-B
Drosophila melanogaster
FBgn0266178
N