OBART04G05590 (Oryza barthii)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 OBART04G05590 T260736_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART04G05590.1 MBD 172 234
OBART04G05590.1 MBD 238 302
OBART04G05590.1 MBD 318 407
OBART04G05590.2 MBD 172 234
OBART04G05590.2 MBD 238 302
OBART04G05590.2 MBD 318 396
OBART04G05590.3 MBD 172 234
OBART04G05590.3 MBD 238 302
OBART04G05590.3 MBD 318 412

Links

Other MBD family TFs
Other Oryza barthii TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00013p00046610 Amborella trichopoda AMTR_s00013p00046610 N
BGIOSGA035306 Oryza indica BGIOSGA035306 N
OBART11G14300 Oryza barthii OBART11G14300 N
OGLUM11G13870 Oryza glumaepatula OGLUM11G13870 N
OLONG_002987 Oryza longistaminata OLONG_002987 N
OMERI11G11960 Oryza meridionalis OMERI11G11960 N
ORGLA11G0122000 Oryza glaberrima ORGLA11G0122000 N
OS11G0498400 Oryza sativa OS11G0498400 N
PGSC0003DMG400020210 Solanum tuberosum PGSC0003DMG400020210 N
SCUD_0001732801 Schistosoma curassoni SCUD_0001732801 N
SMTD_0000299201 Schistosoma mattheei SMTD_0000299201 N
Solyc02g094170.2 Solanum lycopersicum Solyc02g094170.2 N
Traes_3DS_4F293F5BA Triticum aestivum Traes_3DS_4F293F5BA N
VIT_14s0068g01930 Vitis vinifera VIT_14s0068g01930 N