CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI08G06100
(
Oryza meridionalis
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
OMERI08G06100
T260786_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI08G06100.1
MBD
229
323
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPCTIENQSHTATLLQHTRPGTADKA
OMERI08G06100.2
MBD
278
371
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPCTIENQSHTATLLQHTRPGTADK
OMERI08G06100.3
MBD
335
426
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPCTIENQSHTATLLQHTRPGTA
OMERI08G06100.4
MBD
124
221
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPCTIENQSHTATLLQHTRPGTADKAIQC
OMERI08G06100.5
MBD
335
425
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPCTIENQSHTATLLQHTRPGT
OMERI08G06100.6
MBD
335
425
KDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPCTIENQSHTATLLQHTRPGT
Links
Other
MBD
family TFs
Other
Oryza meridionalis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_06000
Arthroderma benhamiae
ARB_06000
N
H101_01923
Trichophyton interdigitale
H101_01923
N
H102_02790
Trichophyton rubrum
H102_02790
N
H105_02807
Trichophyton soudanense
H105_02807
N
MCYG_02750
Microsporum canis
MCYG_02750
N
MGYG_08482
Microsporum gypseum
MGYG_08482
N
SNOG_10852
Stagonospora nodorum
SNOG_10852
N
TEQG_04115
Trichophyton equinum
TEQG_04115
N
TESG_01779
Trichophyton tonsurans
TESG_01779
N
TRV_06342
Trichophyton verrucosum
TRV_06342
N