CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10003785m.g
(
Capsella rubella
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Carubv10003785m.g
T261454_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10003785m
MBD
9
58
VSGELSMVIYGEPAGKAISGEPSKVSGERSMVIYGEPAGKAISGEPSKVS
Carubv10003785m
MBD
135
191
DHTCPRYKWLHPGWICEERVKPSHRLYRYFYDPLGQMYNTKGEVAQMYADTEKTRAL
Links
Other
MBD
family TFs
Other
Capsella rubella
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400040419
Solanum tuberosum
PGSC0003DMG400040419
N
Solyc07g063840.1
Solanum lycopersicum
Solyc07g063840.1
N