Thhalv10006277m.g (Eutrema salsugineum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Thhalv10006277m.g T261633_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10006277m MBD 86 159
Thhalv10006287m MBD 82 155

Links

Other MBD family TFs
Other Eutrema salsugineum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29703.m001533 Ricinus communis 29703.m001533 N 0.743
MBD4 Arabidopsis thaliana AT3G63030 N 0.919
MBD1 Arabidopsis thaliana AT4G22745 N 0.770
Bo4g098290 Brassica oleracea Bo4g098290 N 0.904
Bo8g098350 Brassica oleracea Bo8g098350 N 0.946
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.932
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.784
Bra007723 Brassica rapa Bra007723 N 0.946
Bra040421 Brassica rapa Bra040421 N 0.904
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.905
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.905
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.716
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.716
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N 0.730
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.716
GLYMA02G16930 Glycine max GLYMA02G16930 N 0.703
GLYMA10G02860 Glycine max GLYMA10G02860 N 0.703
Lus10008176.g Linum usitatissimum Lus10008176.g N 0.716
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.730
Lus10029631.g Linum usitatissimum Lus10029631.g N 0.703
Lus10042674.g Linum usitatissimum Lus10042674.g N 0.716
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 0.730
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.730
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N 0.730
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 0.730
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.905
MBD1 Arabidopsis lyrata scaffold_702078.1 N 0.784
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N 0.838