AT5G23930 (Arabidopsis thaliana)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02536 (mTERF) IPR003690 AT5G23930 T262067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G23930
M06996_2.00		 Arabidopsis thaliana
HNYHDCMDYYDYMGCCGCCR
YGGCGGCKRHRRHKGHDRND		 Dap-seq
OMalley et al.(2016)
AT5G23930_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G23930.1 mTERF 91 427

Links

Other mTERF family TFs
Other Arabidopsis thaliana TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28179.m000458 Ricinus communis 28179.m000458 N
cassava44568.m1 Manihot esculenta cassava44568.m1 N
Ciclev10026033m.g Citrus clementina Ciclev10026033m.g N
Cla014299 Citrullus lanatus Cla014299 N
Cucsa.103750 Cucumis sativus Cucsa.103750 N
evm.TU.supercontig_129.20 Carica papaya evm.TU.supercontig_129.20 N
Lus10039632.g Linum usitatissimum Lus10039632.g N
MDP0000312273 Malus domestica MDP0000312273 N
MTR_7g076850 Medicago truncatula MTR_7g076850 N
orange1.1g037355m.g Citrus sinensis orange1.1g037355m.g N
POPTR_0018s04230 Populus trichocarpa POPTR_0018s04230 N
SapurV1A.0263s0050 Salix purpurea SapurV1A.0263s0050 N
SapurV1A.0493s0270 Salix purpurea SapurV1A.0493s0270 N
VIT_17s0000g03540 Vitis vinifera VIT_17s0000g03540 N