CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo7g097370
(
Brassica oleracea
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bo7g097370
T262152_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G23930
M06996_2.00
Arabidopsis thaliana
HNYHDCMDYYDYMGCCGCCR
YGGCGGCKRHRRHKGHDRND
Dap-seq
OMalley et al.(2016)
AT5G23930_col_a
0.783
0.783
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g097370.1
mTERF
94
424
LKLLRSYGFADPQISAIIATYPRFLVENPEKTLRAKLHFLKLNGASSSEITEIVSKVPKILGKRGHVSITGYFDYVKEILQDQDNVKQTNRTRNVSVLRELGVPHKLLLNLLISKAKPVCGKERFEESVEKIVSMGFDPTSKKFVNALYVFYELSEKTIEMKVCIYKKLGFSVDEVWSTFKKWPYLLKYSEKKITQTFETLRECGLTEEEVRAVVKKYPECVGTSEEKIVGSVDTFVELGFTGEEALMIIKRHPQCIGLASDTVKSKIEFLVGKMGWALKDVASTPIVLGFSLEKFILPRCNVIRALVSKGLIGEMPAISSALTSPKLRFL
Links
Other
mTERF
family TFs
Other
Brassica oleracea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
lola
Drosophila melanogaster
FBgn0005630
D
GF11102
Drosophila ananassae
FBgn0088142
N
GH20627
Drosophila grimshawi
FBgn0128090
N
GI20188
Drosophila mojavensis
FBgn0142924
N
GK19011
Drosophila willistoni
FBgn0221009
N
GA30442
Drosophila pseudoobscura
FBgn0264579
I