CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc12g015640.1
(
Solanum lycopersicum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Solyc12g015640.1
T263680_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc12g015640.1.1
mTERF
165
249
LDLDERWYPLLDYLSTFGFKDSHFIQMYERHMPSLQINKSSAQERLEFLLSVGVKHKDIRKIILRQPQLLEYTVENNLKSHVTFL
Solyc12g015640.1.1
mTERF
236
451
YTVENNLKSHVTFLTSLGIPDSRIGQIITATPSLFSYSVENSLKPTVTYLLEEVGIEKNDLAKVVQLSPQILVQRINTSWTARFNFLTRELDAPRDSIVKMVRKHPQLLHYSIEDGLLPRINFFRSIGMRNSEIVKVLTSITQVFSLSLEGNLKPKYSYLVNELGNEVRSLTKYPMYLSLSLDQRIRPRHMFLVSLKRAPKGPFPLSSLVPTDESF
Links
Other
mTERF
family TFs
Other
Solanum lycopersicum
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00088p00159600
Amborella trichopoda
AMTR_s00088p00159600
N
0.753
Aquca_005_00236
Aquilegia coerulea
Aquca_005_00236
N
0.770
BGIOSGA026020
Oryza indica
BGIOSGA026020
N
0.705
Ciclev10008511m.g
Citrus clementina
Ciclev10008511m.g
N
0.788
Cla003344
Citrullus lanatus
Cla003344
N
0.795
Cucsa.304690
Cucumis sativus
Cucsa.304690
N
0.784
gene03554-v1.0-hybrid
Fragaria vesca
gene03554-v1.0-hybrid
N
0.788
GRMZM2G130773
Zea mays
GRMZM2G130773
N
0.712
GSMUA_Achr3G29890_001
Musa acuminata
GSMUA_Achr3G29890_001
N
0.798
LPERR07G17420
Leersia perrieri
LPERR07G17420
N
0.712
Lus10003775.g
Linum usitatissimum
Lus10003775.g
N
0.743
MLOC_4927
Hordeum vulgare
MLOC_4927
N
0.709
OB07G25840
Oryza brachyantha
OB07G25840
N
0.719
OBART07G20100
Oryza barthii
OBART07G20100
N
0.712
OGLUM07G19880
Oryza glumaepatula
OGLUM07G19880
N
0.709
OMERI07G16780
Oryza meridionalis
OMERI07G16780
N
0.702
orange1.1g010604m.g
Citrus sinensis
orange1.1g010604m.g
N
0.788
OS07G0583200
Oryza sativa
OS07G0583200
N
0.709
PDK_20s1307431g001
Phoenix dactylifera
PDK_20s1307431g001
N
0.781
PGSC0003DMG401029813
Solanum tuberosum
PGSC0003DMG401029813
N
0.712
Pm029551
Prunus mume
Pm029551
N
0.801
PRUPE_ppa006059m1g
Prunus persica
PRUPE_ppa006059m1g
N
0.798
PRUPE_ppa015320mg
Prunus persica
PRUPE_ppa015320mg
N
0.760
Sb02g037620
Sorghum bicolor
Sb02g037620
N
0.723
Si029526m.g
Setaria italica
Si029526m.g
N
0.709
VIT_19s0090g01770
Vitis vinifera
VIT_19s0090g01770
N
0.764