CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.3527s0013
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.3527s0013
T264634_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.3527s0013.1.p
mTERF
37
197
AQQAITDYLHTTRSLSYTHAEHIASNASVSVRNLILKLDFSVPTFSKSLRKHLSYHPINEFVFFFESIGIDYNEVSEFLPQKKFFFYEDRSVLDAACALSKFGFPWNKLGNLYKEERLVFVQSPGEIESRLLKLKDLGFTSVAVIGICLAIPRTLSGGGEL
Cagra.3527s0013.1.p
mTERF
135
351
LSKFGFPWNKLGNLYKEERLVFVQSPGEIESRLLKLKDLGFTSVAVIGICLAIPRTLSGGGELGSEIRCLFVMLRRLFDEFYSHHVFEENVDSLHAISRKIRVFYDLGCDNIEMWELMGINKSLFVEYSEEALMRKVEYFCRFGVRKEDVALLILRNPAIMDFDLDKPVFSVTGMLKHFGLSQDEVDAVAQKYPYVIGRNKLKNLPHVLRALDLQER
Cagra.3527s0013.1.p
mTERF
331
420
IGRNKLKNLPHVLRALDLQERIFDRLMNGNHHLLASYSLMDPKEDLDREYQEGLEELQNSRTKTHNVQKLDFLHEIGFGENGMTMKVLQH
Cagra.3527s0013.1.p
mTERF
385
530
EELQNSRTKTHNVQKLDFLHEIGFGENGMTMKVLQHVHGTAIELQERFQILLNNGVIFSKTCMLIRLAPKILNQKPHSIQDKLRFLCGEMGSSLEYLESFPAYLLFDLDNRINPRFRFHKWLVEKGLSEKSYSVASMVATSEKAFI
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF17320
Drosophila ananassae
FBgn0094338
N
GG10036
Drosophila erecta
FBgn0102348
N
GH18587
Drosophila grimshawi
FBgn0126054
N
GI24516
Drosophila mojavensis
FBgn0147238
N
GL12196
Drosophila persimilis
FBgn0149803
N
GD19500
Drosophila simulans
FBgn0190996
N
GJ22689
Drosophila virilis
FBgn0209793
N
GK12738
Drosophila willistoni
FBgn0214747
N
GE25813
Drosophila yakuba
FBgn0242865
N
gfzf
Drosophila melanogaster
FBgn0250732
N