CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb00241
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.Bb00241
T265041_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb00241.1.p
mTERF
172
288
IQESGLVDLVKWFKHNAMTYPQIAKVVCACSGDLGKLRMMIKWLRSIYVKGDFLGRVLANGGSFLNRSFEELEEIIDYLESCGVRRDWIGYVVSRCPQLLNLSLDELETRVRFYTDM
Pavir.Bb00241.1.p
mTERF
247
555
IDYLESCGVRRDWIGYVVSRCPQLLNLSLDELETRVRFYTDMGMDEKDFGTMVYDYPRVLGFLSLEEMNSKVQYLKEFGLSNEELGRLLAFKPQLMACSIEERWKPLVKYLYHLNVSRDGMKRMLLVQPTIFCLDLETVIAPKVQFLQDIGVRSDAIGNVLVKFPPVLTYSLYKKIRPVVIFLLTKGGVKQDDIGKVIALDPQLLGCSIAHKLEVSVKYFRSLGIYHFVLGQMVADFPALLRYNVDILKPKYQYLRRVMVRPLKDLIEFPRFFSYSLEDRIEPRHQTLVANRVNMKLRYMLTGSDEEFA
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022425
Oryza indica
BGIOSGA022425
N
BRADI1G47562
Brachypodium distachyon
BRADI1G47562
N
LPERR06G04790
Leersia perrieri
LPERR06G04790
N
OBART06G05260
Oryza barthii
OBART06G05260
N
OGLUM06G05410
Oryza glumaepatula
OGLUM06G05410
N
OLONG_005462
Oryza longistaminata
OLONG_005462
N
OMERI06G06280
Oryza meridionalis
OMERI06G06280
N
OPUNC06G05020
Oryza punctata
OPUNC06G05020
N
ORUFI06G05310
Oryza rufipogon
ORUFI06G05310
N
Sb01g050320
Sorghum bicolor
Sb01g050320
N