CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fb01913
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.Fb01913
T265060_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fb01913.1.p
mTERF
11
323
LAQWLRENGFDEETVARMSRRCKNLHSLDAGEASGVWDYLLTSVKIERRRLRHVVAKCPKVLTLPVDGKLVPTVQCLATLQAKPGEVAQAIAKFPQILFHSVEEKLCPLLAFFQTLGVSEKQLAKLLMVNPRLISYSIEAKFSQMVDFLVGLGIDKEGMIGKILTKEPYIMGYSVDKRLRPTAEFLKSGVGLQGSDLKRVIMSFPDILSRDVDKILRPNLAFLQSCGFSKSQVMALVAGYPPVLIKSVKHCLEPRIKFLVDEMGRDMGEVVDYPQFFRHGLKRSLEYRHKVLKQNKSSCSLSEMLDCNQKKFA
Pavir.Fb01913.2.p
mTERF
11
323
LAQWLRENGFDEETVARMSRRCKNLHSLDAGEASGVWDYLLTSVKIERRRLRHVVAKCPKVLTLPVDGKLVPTVQCLATLQAKPGEVAQAIAKFPQILFHSVEEKLCPLLAFFQTLGVSEKQLAKLLMVNPRLISYSIEAKFSQMVDFLVGLGIDKEGMIGKILTKEPYIMGYSVDKRLRPTAEFLKSGVGLQGSDLKRVIMSFPDILSRDVDKILRPNLAFLQSCGFSKSQVMALVAGYPPVLIKSVKHCLEPRIKFLVDEMGRDMGEVVDYPQFFRHGLKRSLEYRHKVLKQNKSSCSLSEMLDCNQKKFA
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf184969.g70
Trametes cinnabarina
BN946_scf184969.g70
N
BOTBODRAFT_182178
Botryobasidium botryosum
BOTBODRAFT_182178
N
BOTBODRAFT_25595
Botryobasidium botryosum
BOTBODRAFT_25595
N
CERSUDRAFT_114621
Ceriporiopsis subvermispora
CERSUDRAFT_114621
N
CY34DRAFT_26021
Suillus luteus
CY34DRAFT_26021
N
CY34DRAFT_729847
Suillus luteus
CY34DRAFT_729847
N
DICSQDRAFT_182637
Dichomitus squalens
DICSQDRAFT_182637
N
fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.15__10__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.15__30__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.27__1__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.3__397__3845_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
FOMPIDRAFT_1089631
Fomitopsis pinicola
FOMPIDRAFT_1089631
N
GALMADRAFT_248753
Galerina marginata
GALMADRAFT_248753
N
GLOTRDRAFT_127510
Gloeophyllum trabeum
GLOTRDRAFT_127510
N
GLOTRDRAFT_141479
Gloeophyllum trabeum
GLOTRDRAFT_141479
N
HETIRDRAFT_144838
Heterobasidion irregulare
HETIRDRAFT_144838
N
HETIRDRAFT_412619
Heterobasidion irregulare
HETIRDRAFT_412619
N
HETIRDRAFT_440636
Heterobasidion irregulare
HETIRDRAFT_440636
N
HYDPIDRAFT_42253
Hydnomerulius pinastri
HYDPIDRAFT_42253
N
JAAARDRAFT_37116
Jaapia argillacea
JAAARDRAFT_37116
N
JAAARDRAFT_40854
Jaapia argillacea
JAAARDRAFT_40854
N
K443DRAFT_107454
Laccaria amethystina
K443DRAFT_107454
N
K443DRAFT_676663
Laccaria amethystina
K443DRAFT_676663
N
K443DRAFT_92166
Laccaria amethystina
K443DRAFT_92166
N
LACBIDRAFT_299937
Laccaria bicolor
LACBIDRAFT_299937
N
LACBIDRAFT_303095
Laccaria bicolor
LACBIDRAFT_303095
N
LACBIDRAFT_303137
Laccaria bicolor
LACBIDRAFT_303137
N
LACBIDRAFT_303218
Laccaria bicolor
LACBIDRAFT_303218
N
LACBIDRAFT_304198
Laccaria bicolor
LACBIDRAFT_304198
N
LACBIDRAFT_313619
Laccaria bicolor
LACBIDRAFT_313619
N
M378DRAFT_401669
Amanita muscaria
M378DRAFT_401669
N
M404DRAFT_997965
Pisolithus tinctorius
M404DRAFT_997965
N
M413DRAFT_172756
Hebeloma cylindrosporum
M413DRAFT_172756
N
PAXRUDRAFT_567209
Paxillus rubicundulus
PAXRUDRAFT_567209
N
PAXRUDRAFT_825895
Paxillus rubicundulus
PAXRUDRAFT_825895
N
PILCRDRAFT_823959
Piloderma croceum
PILCRDRAFT_823959
N
PISMIDRAFT_16314
Pisolithus microcarpus
PISMIDRAFT_16314
N
PISMIDRAFT_679110
Pisolithus microcarpus
PISMIDRAFT_679110
N
PLEOSDRAFT_1095820
Pleurotus ostreatus
PLEOSDRAFT_1095820
N
PLICRDRAFT_180699
Plicaturopsis crispa
PLICRDRAFT_180699
N
PLICRDRAFT_58528
Plicaturopsis crispa
PLICRDRAFT_58528
N
SCHCODRAFT_257926
Schizophyllum commune
SCHCODRAFT_257926
N
SCLCIDRAFT_106570
Scleroderma citrinum
SCLCIDRAFT_106570
N
SCLCIDRAFT_1208064
Scleroderma citrinum
SCLCIDRAFT_1208064
N
SERLA73DRAFT_168168
Serpula lacrymans
SERLA73DRAFT_168168
N