TRP4 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT5G13820 T266530_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.839 0.915
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.839 0.894
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.831 0.894
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.831 0.894
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.821 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G13820.1 Myb 535 585
AT5G13820.2 Myb 535 585

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.4.1489.1 Mycosphaerella graminicola e_gw1.4.1489.1 N 0.000
FOXG_15853 Fusarium oxysporum FOXG_15853 N 0.000
MGG_08118 Magnaporthe oryzae MGG_08118 N 0.000
Mycgr3G41050 Zymoseptoria tritici Mycgr3G41050 N 0.000
S40288_04401 Stachybotrys chartarum S40288_04401 N 0.000
SEPMUDRAFT_148190 Sphaerulina musiva SEPMUDRAFT_148190 N 0.000