BGIOSGA001461 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA001461 T266721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.724 0.817
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.724 0.817
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.724 0.817
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.719 0.742
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.719 0.742
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.719 0.742
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.716 0.785
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.716 0.785
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.670 0.742
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.670 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA001461-PA Myb 17 64
BGIOSGA001461-PA Myb 70 115

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

556 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000583 Oryza indica BGIOSGA000583 N
BGIOSGA004704 Oryza indica BGIOSGA004704 I
BGIOSGA012523 Oryza indica BGIOSGA012523 N
BGIOSGA012525 Oryza indica BGIOSGA012525 N
BGIOSGA036760 Oryza indica BGIOSGA036760 N
BRADI1G63910 Brachypodium distachyon BRADI1G63910 N
BRADI2G22230 Brachypodium distachyon BRADI2G22230 I
BRADI2G53500 Brachypodium distachyon BRADI2G53500 N
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I
F775_02926 Aegilops tauschii F775_02926 N
F775_03183 Aegilops tauschii F775_03183 N
F775_04954 Aegilops tauschii F775_04954 N
F775_23296 Aegilops tauschii F775_23296 N
F775_31089 Aegilops tauschii F775_31089 N
F775_31341 Aegilops tauschii F775_31341 I
gene21364-v1.0-hybrid Fragaria vesca gene21364-v1.0-hybrid I
GRMZM2G005207 Zea mays GRMZM2G005207 I
GRMZM2G029282 Zea mays GRMZM2G029282 N
GRMZM2G030272 Zea mays GRMZM2G030272 N
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I
LPERR01G30490 Leersia perrieri LPERR01G30490 I
LPERR03G13630 Leersia perrieri LPERR03G13630 N
LPERR10G04210 Leersia perrieri LPERR10G04210 I
MDP0000460139 Malus domestica MDP0000460139 I
MDP0000828055 Malus domestica MDP0000828055 I
MLOC_34506 Hordeum vulgare MLOC_34506 N
MLOC_3853 Hordeum vulgare MLOC_3853 N
MLOC_57764 Hordeum vulgare MLOC_57764 N
OB01G44150 Oryza brachyantha OB01G44150 I
OB03G25300 Oryza brachyantha OB03G25300 N
OBART01G35350 Oryza barthii OBART01G35350 I
OBART01G35360 Oryza barthii OBART01G35360 N
OBART03G15470 Oryza barthii OBART03G15470 N
OBART05G20320 Oryza barthii OBART05G20320 N
OBART12G00800 Oryza barthii OBART12G00800 N
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N
OGLUM05G21430 Oryza glumaepatula OGLUM05G21430 N
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N
OLONG_001744 Oryza longistaminata OLONG_001744 N
OLONG_028722 Oryza longistaminata OLONG_028722 N
OMERI01G32480 Oryza meridionalis OMERI01G32480 I
OMERI01G32490 Oryza meridionalis OMERI01G32490 I
OMERI01G32500 Oryza meridionalis OMERI01G32500 N
OMERI12G00120 Oryza meridionalis OMERI12G00120 N
ONIVA01G40370 Oryza nivara ONIVA01G40370 I
ONIVA01G40380 Oryza nivara ONIVA01G40380 N
ONIVA03G16490 Oryza nivara ONIVA03G16490 N
ONIVA05G21450 Oryza nivara ONIVA05G21450 N
ONIVA12G00800 Oryza nivara ONIVA12G00800 N
OPUNC01G34270 Oryza punctata OPUNC01G34270 N
OPUNC01G34280 Oryza punctata OPUNC01G34280 I
OPUNC01G34290 Oryza punctata OPUNC01G34290 N
OPUNC03G15030 Oryza punctata OPUNC03G15030 N
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I
ORGLA01G0291900 Oryza glaberrima ORGLA01G0291900 I
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N
ORGLA05G0177300 Oryza glaberrima ORGLA05G0177300 N
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N
ORUFI01G38670 Oryza rufipogon ORUFI01G38670 I
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N
ORUFI12G01140 Oryza rufipogon ORUFI12G01140 N
OS03G0321700 Oryza sativa OS03G0321700 N
Pavir.Ca00085 Panicum virgatum Pavir.Ca00085 N
Pavir.Ea03256 Panicum virgatum Pavir.Ea03256 N
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N
Pavir.J20374 Panicum virgatum Pavir.J20374 N
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I
Sb01g036870 Sorghum bicolor Sb01g036870 N
Sb03g038190 Sorghum bicolor Sb03g038190 N
Sb08g002520 Sorghum bicolor Sb08g002520 I
Si010813m.g Setaria italica Si010813m.g N
Si039519m.g Setaria italica Si039519m.g N
TRAES3BF081400030CFD_g Triticum aestivum TRAES3BF081400030CFD_g I
Traes_1AL_309623B48 Triticum aestivum Traes_1AL_309623B48 N
Traes_1AL_B24F28600 Triticum aestivum Traes_1AL_B24F28600 I
Traes_1BL_46340D685 Triticum aestivum Traes_1BL_46340D685 N
Traes_1BL_B4AFDB663 Triticum aestivum Traes_1BL_B4AFDB663 I
Traes_1DL_DFE1721E0 Triticum aestivum Traes_1DL_DFE1721E0 N
Traes_4AS_70DF607CC Triticum aestivum Traes_4AS_70DF607CC N
Traes_4BL_A8C6FBEB6 Triticum aestivum Traes_4BL_A8C6FBEB6 N
Traes_4DL_3140A8240 Triticum aestivum Traes_4DL_3140A8240 N
TRIUR3_06231 Triticum urartu TRIUR3_06231 N
TRIUR3_16097 Triticum urartu TRIUR3_16097 N
TRIUR3_22129 Triticum urartu TRIUR3_22129 N
TRIUR3_34396 Triticum urartu TRIUR3_34396 I