BGIOSGA013620 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA013620 T266821_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.821 0.872
HHO3
M02289_2.00 		Arabidopsis thaliana
NWGATWCBNN
NNVGWATCWN		 PBM
Weirauch et al.(2014)
pTH7278 		0.813 0.872
HHO2
M02290_2.00 		Arabidopsis thaliana
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH7115 		0.813 0.872
HHO3
M07016_2.00 		Arabidopsis thaliana
NNDHNNAAKATTCY
RGAATMTTNNDHNN		 Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a 		0.813 0.872
HHO3
M07017_2.00 		Arabidopsis thaliana
HNNAAKATTCY
RGAATMTTNND		 Dap-seq
OMalley et al.(2016)
At1g25550_col 		0.813 0.872
HHO2
M07029_2.00 		Arabidopsis thaliana
AKATTCY
RGAATMT		 Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a 		0.813 0.872
HHO2
M07030_2.00 		Arabidopsis thaliana
RDATYNNAGATTC
GAATCTNNRATHY		 Dap-seq
OMalley et al.(2016)
At1g68670_col 		0.813 0.872
HHO6
M07024_2.00 		Arabidopsis thaliana
GAATCTNNDAT
ATHNNAGATTC		 Dap-seq
OMalley et al.(2016)
AT1G49560_col_a 		0.803 0.894
HHO6
M07025_2.00 		Arabidopsis thaliana
DGAATCTHNGATHCN
NGDATCNDAGATTCH		 Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a 		0.803 0.894
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.772 0.851
EFM
M07044_2.00 		Arabidopsis thaliana
NNGAATATTCY
RGAATATTCNN		 Dap-seq
OMalley et al.(2016)
At2g03500_col_a 		0.767 0.872
EFM
M07045_2.00 		Arabidopsis thaliana
RGAATCHWAGATTC
GAATCTWDGATTCY		 Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a 		0.767 0.872
HRS1
M02284_2.00 		Arabidopsis thaliana
AGATTCYN
NRGAATCT		 PBM
Weirauch et al.(2014)
pTH7118 		0.742 0.851
HRS1
M01068_2.00 		Arabidopsis thaliana
NAGATTCBNN
NNVGAATCTN		 PBM
Sullivan et al.(2014)
pTH7648 		0.742 0.851
HRS1
M07004_2.00 		Arabidopsis thaliana
NDDWWVNAAKATTCY
RGAATMTTNBWWHHN		 Dap-seq
OMalley et al.(2016)
At1g13300_col_a 		0.742 0.851
PK14402.1
M02352_2.00 		Cannabis sativa
NDWGATTCSNN
NNSGAATCWHN		 PBM
Weirauch et al.(2014)
pTH9491 		0.732 0.830
HHO5
M07112_2.00 		Arabidopsis thaliana
HNDAAGATTCH
DGAATCTTHND		 Dap-seq
OMalley et al.(2016)
AT4G37180_col_a 		0.709 0.830
HHO5
M07113_2.00 		Arabidopsis thaliana
NNDAAGATTCY
RGAATCTTHNN		 Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a 		0.709 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA013620-PA Myb 226 277

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

361 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003455.1 Alligator sinensis Alligator_sinensis_CCG003455.1 I 0.000
Cmyd_10007335 Chelonia mydas Cmyd_10007335 I 0.000
ENSAMEG00000006419 Ailuropoda melanoleuca ENSAMEG00000006419 I 0.000
ENSAMXG00000001207 Astyanax mexicanus ENSAMXG00000001207 I 0.000
ZBTB3 Bos taurus ENSBTAG00000021329 I 0.000
ENSBTAP00000051139-D1 Bos grunniens ENSBTAP00000051139-D1 I 0.000
ZBTB3 Canis familiaris ENSCAFG00000015650 I 0.000
ZBTB3 Choloepus hoffmanni ENSCHOG00000012845 I 0.000
ZBTB3 Callithrix jacchus ENSCJAG00000018693 I 0.000
ZBTB3 Cavia porcellus ENSCPOG00000011665 I 0.000
ENSCSAG00000006712 Chlorocebus sabaeus ENSCSAG00000006712 I 0.000
zbtb3 Danio rerio ENSDARG00000036235 I 0.000
ENSDNOG00000006546 Dasypus novemcinctus ENSDNOG00000006546 I 0.000
ZBTB3 Dasypus novemcinctus ENSDNOG00000043011 I 0.000
Zbtb3 Dipodomys ordii ENSDORG00000015697 I 0.000
ZBTB3 Felis catus ENSFCAG00000027690 I 0.000
ZBTB3 Homo sapiens ENSG00000185670 I 0.000
zbtb3 Gasterosteus aculeatus ENSGACG00000016930 I 0.000
ZBTB3 Gorilla gorilla ENSGGOG00000011735 I 0.000
ENSLACG00000006879 Latimeria chalumnae ENSLACG00000006879 I 0.000
ENSLOCG00000001327 Lepisosteus oculatus ENSLOCG00000001327 I 0.000
ENSMEUG00000015659 Macropus eugenii ENSMEUG00000015659 I 0.000
ZBTB3 Microcebus murinus ENSMICG00000009961 I 0.000
ZBTB3 Myotis lucifugus ENSMLUG00000011020 I 0.000
ENSMMUG00000014369 Macaca mulatta ENSMMUG00000014369 I 0.000
ENSMPUG00000013694 Mustela putorius furo ENSMPUG00000013694 I 0.000
Zbtb3 Mus musculus ENSMUSG00000071661 D 0.000
ENSNLEG00000004096 Nomascus leucogenys ENSNLEG00000004096 I 0.000
ENSOANG00000001309 Ornithorhynchus anatinus ENSOANG00000001309 I 0.000
ENSOARG00000016929 Ovis aries ENSOARG00000016929 I 0.000
ZBTB3 Oryctolagus cuniculus ENSOCUG00000008921 I 0.000
ZBTB3 Otolemur garnettii ENSOGAG00000011414 I 0.000
ENSONIG00000005336 Oreochromis niloticus ENSONIG00000005336 I 0.000
ENSP00000378286 Macaca fascicularis ENSP00000378286 I 0.000
ENSPANG00000008469 Papio anubis ENSPANG00000008469 I 0.000
ENSPFOG00000009453 Poecilia formosa ENSPFOG00000009453 I 0.000
ENSPPYG00000003148 Pongo abelii ENSPPYG00000003148 I 0.000
ENSPSIG00000001786 Pelodiscus sinensis ENSPSIG00000001786 I 0.000
ZBTB3 Pan troglodytes ENSPTRG00000003785 I 0.000
ZBTB3 Pteropus vampyrus ENSPVAG00000003477 I 0.000
Zbtb3 Rattus norvegicus ENSRNOG00000019461 I 0.000
ENSSSCG00000025351 Sus scrofa ENSSSCG00000025351 I 0.000
ENSSTOG00000027839 Ictidomys tridecemlineatus ENSSTOG00000027839 I 0.000
zbtb3 Tetraodon nigroviridis ENSTNIG00000003382 I 0.000
zbtb3 Takifugu rubripes ENSTRUG00000013773 I 0.000
ZBTB3 Tursiops truncatus ENSTTRG00000002477 I 0.000
ENSXMAG00000003145 Xiphophorus maculatus ENSXMAG00000003145 I 0.000
Ogr03307 Ophisaurus gracilis Ogr03307 I 0.000
Pvit_09391 Pogona vitticeps Pvit_09391 I 0.000
zbtb3 Xenopus tropicalis XB-GENE-991962 I 0.000