Bo3g018460 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g018460 T267220_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G58900
M07146_2.00 		Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD		 Dap-seq
OMalley et al.(2016)
At5g58900_col_a 		0.872 0.968
AT5G58900
M07147_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a 		0.872 0.968
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.750 0.849
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.750 0.849
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.681 0.828
AT5G05790
M07119_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWHH
DDWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g05790_col_a 		0.677 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g018460.1 Myb 141 188

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004412 Ailuropoda melanoleuca ENSAMEG00000004412 N
MYCL Bos taurus ENSBTAG00000006338 N
ENSBTAP00000050548-D1 Bos grunniens ENSBTAP00000050548-D1 N
MYCL Canis familiaris ENSCAFG00000003022 N
ENSCJAG00000002700 Callithrix jacchus ENSCJAG00000002700 N
ENSCPOG00000012827 Cavia porcellus ENSCPOG00000012827 N
ENSCSAG00000001138 Chlorocebus sabaeus ENSCSAG00000001138 N
MYCL Dasypus novemcinctus ENSDNOG00000001996 N
MYCL Equus caballus ENSECAG00000008765 N
MYCL Erinaceus europaeus ENSEEUG00000004078 N
MYCL Felis catus ENSFCAG00000022640 N
MYCL Homo sapiens ENSG00000116990 N
MYCL Gorilla gorilla ENSGGOG00000001693 N
ENSLAFG00000001935 Loxodonta africana ENSLAFG00000001935 N
ENSMEUG00000000536 Macropus eugenii ENSMEUG00000000536 N
ENSMICG00000016303 Microcebus murinus ENSMICG00000016303 N
MYCL Myotis lucifugus ENSMLUG00000000337 N
MYCL Macaca mulatta ENSMMUG00000016223 N
ENSMMUP00000021322 Macaca fascicularis ENSMMUP00000021322 N
MYCL Monodelphis domestica ENSMODG00000017647 N
ENSMPUG00000014286 Mustela putorius furo ENSMPUG00000014286 N
Mycl Mus musculus ENSMUSG00000028654 N
ENSNLEG00000012063 Nomascus leucogenys ENSNLEG00000012063 N
ENSOARG00000020147 Ovis aries ENSOARG00000020147 N
MYCL Otolemur garnettii ENSOGAG00000015380 N
MYCL Ochotona princeps ENSOPRG00000003229 N
ENSPANG00000010238 Papio anubis ENSPANG00000010238 N
ENSPPYG00000001498 Pongo abelii ENSPPYG00000001498 N
MYCL Pan troglodytes ENSPTRG00000000580 N
MYCL Pteropus vampyrus ENSPVAG00000003347 N
Mycl Rattus norvegicus ENSRNOG00000014259 N
ENSSHAG00000018449 Sarcophilus harrisii ENSSHAG00000018449 N
ENSSSCG00000003668 Sus scrofa ENSSSCG00000003668 N
ENSSTOG00000005037 Ictidomys tridecemlineatus ENSSTOG00000005037 N
ENSTSYG00000009275 Tarsius syrichta ENSTSYG00000009275 N
MYCL Tursiops truncatus ENSTTRG00000005113 N
Myotis_brandtii_MYCL1_10028964 Myotis brandtii Myotis_brandtii_MYCL1_10028964 N
mycl Xenopus tropicalis XB-GENE-6453835 N