Bo7g098880 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g098880 T267508_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.782 0.894
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.782 0.894
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.782 0.851
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.772 0.830
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.772 0.830
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.772 0.830
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.771 0.830
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.771 0.830
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.764 0.809
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.761 0.830
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.752 0.787
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.739 0.745
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.739 0.745
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.739 0.745
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.721 0.787
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.721 0.787
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.715 0.787
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.704 0.766
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.704 0.766
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.704 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g098880.1 Myb 103 150

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

565 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EDP45324.1 Malassezia globosa EDP45324.1 N
estExt_fgeneshMC_pg.C_30057 Mucor circinelloides estExt_fgeneshMC_pg.C_30057 N
estExt_fgeneshPB_pg.C_440039 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_440039 N
estExt_fgeneshPB_pg.C_50592 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_50592 N
fgeneshMC_pg.1_#_1575 Mucor circinelloides fgeneshMC_pg.1_#_1575 N
fgeneshMC_pg.3_#_885 Mucor circinelloides fgeneshMC_pg.3_#_885 I
fgeneshMC_pg.4_#_663 Mucor circinelloides fgeneshMC_pg.4_#_663 N
fgeneshMC_pg.8_#_88 Mucor circinelloides fgeneshMC_pg.8_#_88 N
fgeneshPB_pg.2__345 Phycomyces blakesleeanus fgeneshPB_pg.2__345 N
fgeneshPB_pg.3__11 Phycomyces blakesleeanus fgeneshPB_pg.3__11 N
GLOINDRAFT_44505 Rhizophagus irregularis GLOINDRAFT_44505 N
gw1.8.425.1 Phycomyces blakesleeanus gw1.8.425.1 N
K437DRAFT_222727 Tilletiaria anomala K437DRAFT_222727 N
MSY001_2707 Malassezia sympodialis MSY001_2707 N
PHSY_003887 Pseudozyma hubeiensis PHSY_003887 N
PSEUBRA_SCAF2g02695 Pseudozyma brasiliensis PSEUBRA_SCAF2g02695 N
RO3G_04904 Rhizopus oryzae RO3G_04904 N
RO3G_05037 Rhizopus oryzae RO3G_05037 N
RO3G_06395 Rhizopus oryzae RO3G_06395 I
RO3G_06899 Rhizopus oryzae RO3G_06899 N
RO3G_09726 Rhizopus oryzae RO3G_09726 N
RO3G_14274 Rhizopus oryzae RO3G_14274 N
RO3G_16953 Rhizopus oryzae RO3G_16953 N
sr12730 Sporisorium reilianum sr12730 N
TRV_07259 Trichophyton verrucosum TRV_07259 I
UHOR_02465 Ustilago hordei UHOR_02465 I