CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra029866
(
Brassica rapa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bra029866
T268046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.887
0.979
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra029866.1-P
Myb
85
135
RLVWTPQLHKRFVDAGAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Brassica rapa
TFs
243 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CPIJ000635
Culex quinquefasciatus
CPIJ000635
N