CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_3000957
(
Arabidopsis lyrata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pg.C_scaffold_3000957
T270674_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_3000957
Myb
5
52
PLWTRVDDKRFESALVQFPEGSPYFLENIAQFLQKPLKDVKYYYQALV
fgenesh1_pg.C_scaffold_3000957
Myb
94
139
AWSPNEHKLFLDGLNKYGKGDWKSIARECVKTRSPMQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis lyrata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.19424s0976
Boechera stricta
Bostr.19424s0976
N
0.668
Bostr.19424s0981
Boechera stricta
Bostr.19424s0981
I
0.664
Bostr.22252s0001
Boechera stricta
Bostr.22252s0001
I
0.766