GSMUA_AchrUn_randomG02160_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_AchrUn_randomG02160_001 T272700_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB30
M07089_2.00 		Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN		 Dap-seq
OMalley et al.(2016)
MYB30_col_a 		0.819 0.882
MYB30
M07090_2.00 		Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD		 Dap-seq
OMalley et al.(2016)
MYB30_colamp_a 		0.819 0.882
MYB60
M07001_2.00 		Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND		 Dap-seq
OMalley et al.(2016)
MYB60_col 		0.815 0.871
MYB94
M02298_2.00 		Arabidopsis thaliana
DACCGGTH
DACCGGTH		 PBM
Weirauch et al.(2014)
pTH7085 		0.805 0.860
MYB94
M07094_2.00 		Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD		 Dap-seq
OMalley et al.(2016)
MYB94_col_b 		0.805 0.860
MYB96
M07153_2.00 		Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD		 Dap-seq
OMalley et al.(2016)
MYB96_colamp_a 		0.805 0.860
MYB96
M07154_2.00 		Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR		 Dap-seq
OMalley et al.(2016)
MYB96_col_b 		0.805 0.860
ATY13
M07035_2.00 		Arabidopsis thaliana
HAMCHMCCAMCHAHH
DDTDGKTGGKDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_col_a 		0.796 0.892
ATY13
M07036_2.00 		Arabidopsis thaliana
HAMCHHCCAACHAHH
DDTDGTTGGDDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_colamp_a 		0.796 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_AchrUn_randomP02160_001 Myb 14 61
GSMUA_AchrUn_randomP02160_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

312 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001218201 Angiostrongylus cantonensis ACAC_0001218201 N 0.000
ACOC_0000329601 Angiostrongylus costaricensis ACOC_0000329601 N 0.000
ALUE_0001180601 Ascaris lumbricoides ALUE_0001180601 N 0.000
ANCCAN_15383 Ancylostoma caninum ANCCAN_15383 N 0.000
ANCCEY_04433 Ancylostoma ceylanicum ANCCEY_04433 N 0.000
ASIM_0001160201 Anisakis simplex ASIM_0001160201 N 0.000
Bm4813 Brugia malayi Bm4813 N 0.000
D917_05194 Trichinella nativa D917_05194 N 0.000
D918_01735 Trichuris suis D918_01735 N 0.000
DME_0000413601 Dracunculus medinensis DME_0000413601 N 0.000
EEL_0000340601 Elaeophora elaphi EEL_0000340601 N 0.000
GPUH_0002215801 Gongylonema pulchrum GPUH_0002215801 N 0.000
Hba_00636 Heterorhabditis bacteriophora Hba_00636 N 0.000
HCOI00202100 Haemonchus contortus HCOI00202100 N 0.000
HPLM_0000008901 Haemonchus placei HPLM_0000008901 N 0.000
HPLM_0001566201 Haemonchus placei HPLM_0001566201 N 0.000
L596_g21980 Steinernema carpocapsae L596_g21980 N 0.000
L889_g15502 Steinernema feltiae L889_g15502 N 0.000
L892_g11079 Steinernema scapterisci L892_g11079 N 0.000
L893_g2345 Steinernema glaseri L893_g2345 N 0.000
L898_g30040 Steinernema monticolum L898_g30040 N 0.000
LOAG_06215 Loa loa LOAG_06215 N 0.000
nAv.1.0.1.g02191 Acanthocheilonema viteae nAv.1.0.1.g02191 N 0.000
NBR_0002098301 Nippostrongylus brasiliensis NBR_0002098301 N 0.000
nDi.2.2.2.g02408 Dirofilaria immitis nDi.2.2.2.g02408 N 0.000
NECAME_03414 Necator americanus NECAME_03414 N 0.000
nLs.2.1.2.g00583 Litomosoides sigmodontis nLs.2.1.2.g00583 N 0.000
nOo.2.0.1.g01013 Onchocerca ochengi nOo.2.0.1.g01013 N 0.000
nRc.2.0.1.g25601 Romanomermis culicivorax nRc.2.0.1.g25601 N 0.000
OESDEN_04377 Oesophagostomum dentatum OESDEN_04377 N 0.000
OFLC_0001358201 Onchocerca flexuosa OFLC_0001358201 N 0.000
PPA09670 Pristionchus pacificus PPA09670 N 0.000
PTRK_0000540400 Parastrongyloides trichosuri PTRK_0000540400 N 0.000
RSKR_0000949900 Rhabditophanes kr3021 RSKR_0000949900 N 0.000
SPAL_0001197000 Strongyloides papillosus SPAL_0001197000 N 0.000
SSTP_0000398400 Strongyloides stercoralis SSTP_0000398400 N 0.000
SVE_0387200 Strongyloides venezuelensis SVE_0387200 N 0.000
SVUK_0000871301 Strongylus vulgaris SVUK_0000871301 N 0.000
TCLT_0000451401 Thelazia callipaeda TCLT_0000451401 N 0.000
TCNE_0001236501 Toxocara canis TCNE_0001236501 N 0.000
TELCIR_05319 Teladorsagia circumcincta TELCIR_05319 N 0.000
WBGene00237735 Onchocerca volvulus WBGene00237735 N 0.000
WUBG_10166 Wuchereria bancrofti WUBG_10166 N 0.000