CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HpaG811872
(
Hyaloperonospora arabidopsidis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
HpaG811872
T273402_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra72796
M02331_2.00
Phytophthora ramorum
NHAYCYNNN
NNNRGRTDN
PBM
Weirauch et al.(2014)
pTH7803
0.825
0.894
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HpaP811872
Myb
12
58
KGIWSQDEHDRFLEAIKLYPKGPWRTIADHVGTRSVRQVQTHAQKYQ
Links
Other
Myb/SANT
family TFs
Other
Hyaloperonospora arabidopsidis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29569.m000148
Ricinus communis
29569.m000148
N
0.000
Aquca_058_00049
Aquilegia coerulea
Aquca_058_00049
N
0.000
AT2G43280
Arabidopsis thaliana
AT2G43280
N
0.000
Bra037724
Brassica rapa
Bra037724
N
0.000
cassava19693.m1
Manihot esculenta
cassava19693.m1
N
0.000
cassava45111.m1
Manihot esculenta
cassava45111.m1
N
0.000
Cla017785
Citrullus lanatus
Cla017785
N
0.000
fgenesh2_kg.4__2495__AT2G43280.1
Arabidopsis lyrata
fgenesh2_kg.4__2495__AT2G43280.1
N
0.000
GLYMA04G12273
Glycine max
GLYMA04G12273
N
0.000
MTR_3g006370
Medicago truncatula
MTR_3g006370
N
0.000
POPTR_0017s05820
Populus trichocarpa
POPTR_0017s05820
N
0.000
SapurV1A.1606s0030
Salix purpurea
SapurV1A.1606s0030
N
0.000
SapurV1A.3204s0030
Salix purpurea
SapurV1A.3204s0030
N
0.000
TCM_020035
Theobroma cacao
TCM_020035
N
0.000