CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR02G26970 *(Leersia perrieri)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	LPERR02G26970	T273677_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB92 M07123_2.00	Arabidopsis thaliana	NHHACCTAMY	RKTAGGTDDN	Dap-seq OMalley et al.(2016) MYB92_100ng20cy_b	0.805	0.785
MYB92 M07124_2.00	Arabidopsis thaliana	NNNNWNNYYYACCWAMYHH	DDRKTWGGTRRRNNWNNNN	Dap-seq OMalley et al.(2016) MYB92_colamp_a	0.805	0.785
AtMYB93 M07020_2.00	Arabidopsis thaliana	HDNYYYAMCWAMYHHHHHHHH	DDDDDDDDRKTWGKTRRRNHD	Dap-seq OMalley et al.(2016) MYB93_col_a	0.778	0.806
AtMYB93 M07021_2.00	Arabidopsis thaliana	NNHNBYYYAMCWAMY	RKTWGKTRRRVNDNN	Dap-seq OMalley et al.(2016) MYB93_colamp_a	0.778	0.806
MYB107 M07061_2.00	Arabidopsis thaliana	NDDWDBBYYACCWAMYHH	DDRKTWGGTRRVVHWHHN	Dap-seq OMalley et al.(2016) MYB107_col_a	0.761	0.785
MYB107 M07062_2.00	Arabidopsis thaliana	WNBYYYACCWAMYH	DRKTWGGTRRRVNW	Dap-seq OMalley et al.(2016) MYB107_colamp_a	0.761	0.785
MYB106 M11040_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AT3G01140_01	0.755	0.785
AtMYB17 M07099_2.00	Arabidopsis thaliana	YYYACCWACCWHHHH	DDDDWGGTWGGTRRR	Dap-seq OMalley et al.(2016) MYB17_colamp_a	0.696	0.753
MYB39 M07106_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_col_a	0.682	0.774
MYB39 M07107_2.00	Arabidopsis thaliana	NYYYACCWAMYWHHHHHHHNH	DNDDDDDDDWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_colamp_a	0.682	0.774
MYB55 M00876_2.00	Arabidopsis thaliana	ACCWAMCD	HGKTWGGT	PBM Franco-Zorrilla et al.(2014) MYB55	0.676	0.667
MYB55 M07102_2.00	Arabidopsis thaliana	HNNNHBYAMCWAMCD	HGKTWGKTRVDNNND	Dap-seq OMalley et al.(2016) MYB55_colamp_a	0.676	0.667
MYB55 M07103_2.00	Arabidopsis thaliana	NYNYAMCHACCRHH	DDYGGTDGKTRNRN	Dap-seq OMalley et al.(2016) MYB55_col	0.676	0.667
PK28187.1 M01286_2.00	Cannabis sativa	TACCTACC	GGTAGGTA	PBM Lambert et al.(2019) pTH11305	0.675	0.763
MYB58 M07005_2.00	Arabidopsis thaliana	NNYYYACCWAMCHHH	DDDGKTWGGTRRRNN	Dap-seq OMalley et al.(2016) MYB58_col_a	0.674	0.677
MYB58 M07006_2.00	Arabidopsis thaliana	HNNYHYACCWAMCHHHNNNNH	DNNNNDDDGKTWGGTRDRNND	Dap-seq OMalley et al.(2016) MYB58_colamp_a	0.674	0.677
AtMYB41 M07109_2.00	Arabidopsis thaliana	DHDBBYYACCTAMYW	WRKTAGGTRRVVHDH	Dap-seq OMalley et al.(2016) MYB41_col_a	0.673	0.731
AtMYB10 M07081_2.00	Arabidopsis thaliana	YYYACCWAMCHHHHNH	DNDDDDGKTWGGTRRR	Dap-seq OMalley et al.(2016) MYB10_col_a	0.665	0.688
AtMYB10 M07082_2.00	Arabidopsis thaliana	NYYYACCWAMCHHH	DDDGKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB10_colamp_a	0.665	0.688
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR02G26970.1	Myb	14	61	KGPWTTEEDDKLMEYIQKNGHGSWRALPKLAGLNRCGKSCRLRWTNYL
LPERR02G26970.1	Myb	67	112	RGKFTSAEKDTILQLHAVLGNKWSAIAKHLPGRTDNEIKNYWNTHL

Links
Other Myb/SANT family TFs
Other *Leersia perrieri* TFs

815 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Eucgr.C00590	Eucalyptus grandis	Eucgr.C00590	N
fgenesh2_kg.4__494__AT2G25820.1	Arabidopsis lyrata	fgenesh2_kg.4__494__AT2G25820.1	N
GSMUA_Achr4G24580_001	Musa acuminata	GSMUA_Achr4G24580_001	N
GSMUA_Achr4G26980_001	Musa acuminata	GSMUA_Achr4G26980_001	N
GSMUA_Achr5G06570_001	Musa acuminata	GSMUA_Achr5G06570_001	N
GSMUA_Achr5G13500_001	Musa acuminata	GSMUA_Achr5G13500_001	N
GSMUA_Achr7G06970_001	Musa acuminata	GSMUA_Achr7G06970_001	N
GSMUA_AchrUn_randomG27090_001	Musa acuminata	GSMUA_AchrUn_randomG27090_001	N
XM_002324763.1	Populus trichocarpa	POPTR_0018s00270	N

LPERR02G26970 (Leersia perrieri) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

815 Related TFs

LPERR02G26970 **(Leersia perrieri)
Myb/SANT**