CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR07G20400 *(Leersia perrieri)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	LPERR07G20400	T273774_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB55 M00876_2.00	Arabidopsis thaliana	ACCWAMCD	HGKTWGGT	PBM Franco-Zorrilla et al.(2014) MYB55	0.787	0.817
MYB55 M07102_2.00	Arabidopsis thaliana	HNNNHBYAMCWAMCD	HGKTWGKTRVDNNND	Dap-seq OMalley et al.(2016) MYB55_colamp_a	0.787	0.817
MYB55 M07103_2.00	Arabidopsis thaliana	NYNYAMCHACCRHH	DDYGGTDGKTRNRN	Dap-seq OMalley et al.(2016) MYB55_col	0.787	0.817
MYB61 M07002_2.00	Arabidopsis thaliana	HNYAMCHACCDNHNH	DNDNHGGTDGKTRND	Dap-seq OMalley et al.(2016) MYB61_col_a	0.754	0.785
MYB61 M07003_2.00	Arabidopsis thaliana	NHNYACCWAMCDH	DHGKTWGGTRNDN	Dap-seq OMalley et al.(2016) MYB61_colamp_a	0.754	0.785
MYB46 M00877_2.00	Arabidopsis thaliana	NAMCNDHHN	NDDHNGKTN	PBM Franco-Zorrilla et al.(2014) MYB46	0.664	0.763
MYB46 M11046_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ATMYB46_Q6	0.664	0.763
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR07G20400.1	Myb	15	62	RGLWSPEEDEKLMNHIAKYGHGCWSSVPKLAGLERCGKSCRLRWINYL
LPERR07G20400.1	Myb	68	113	RGAFSQEEEDLIIHLHSMLGNKWSQIAAQLPGRTDNEVKNFWNSYI

Links
Other Myb/SANT family TFs
Other *Leersia perrieri* TFs