CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_0095s0040
(
Medicago truncatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MTR_0095s0040
T274666_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN
NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.733
0.830
PK06103.1
M02348_2.00
Cannabis sativa
TGCCCTAG
CTAGGGCA
PBM
Weirauch et al.(2014)
pTH9649
0.729
0.830
TRB2
M02314_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Weirauch et al.(2014)
pTH7094
0.719
0.809
TRB2
M01083_2.00
Arabidopsis thaliana
HRMCCTAR
YTAGGKYD
PBM
Sullivan et al.(2014)
pTH7260
0.719
0.809
TRB2
M07157_2.00
Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD
Dap-seq
OMalley et al.(2016)
TBP3_col_a
0.719
0.809
TRB2
M07158_2.00
Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD
Dap-seq
OMalley et al.(2016)
TBP3_colamp_a
0.719
0.809
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.719
0.809
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH16773
Myb
5
57
KQKWTSEEEAALKAGVAKHGVGKWRTIIKDPEFNRVLFIRSNVDLKDKWRNLS
Links
Other
Myb/SANT
family TFs
Other
Medicago truncatula
TFs
217 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_075020
Acremonium chrysogenum
ACRE_075020
N
0.000
CCM_07503
Cordyceps militaris
CCM_07503
N
0.000
CFIO01_13578
Colletotrichum fioriniae
CFIO01_13578
N
0.000
CGGC5_547
Colletotrichum gloeosporioides
CGGC5_547
N
0.000
Cob_10044
Colletotrichum orbiculare
Cob_10044
N
0.000
CPUR_04956
Claviceps purpurea
CPUR_04956
N
0.000
CSUB01_05031
Colletotrichum sublineola
CSUB01_05031
N
0.000
estExt_fgenesh1_pg.C_10747
Cryphonectria parasitica
estExt_fgenesh1_pg.C_10747
N
0.000
estExt_Genewise1Plus.C_sca_10_chr8_2_00572
Nectria haematococca
estExt_Genewise1Plus.C_sca_10_chr8_2_00572
N
0.000
F503_04396
Ophiostoma piceae uamh
F503_04396
N
0.000
FFUJ_08604
Fusarium fujikuroi
FFUJ_08604
N
0.000
FGRRES_12742
Fusarium graminearum
FGRRES_12742
N
0.000
FOXG_09425
Fusarium oxysporum
FOXG_09425
N
0.000
FPSE_03532
Fusarium pseudograminearum
FPSE_03532
N
0.000
FVEG_07057
Fusarium verticillioides
FVEG_07057
N
0.000
GGTG_09471
Gaeumannomyces graminis
GGTG_09471
N
0.000
GLRG_00168
Colletotrichum graminicola
GLRG_00168
N
0.000
HMPREF1624_03120
Sporothrix schenckii
HMPREF1624_03120
N
0.000
MAJ_03545
Metarhizium majus
MAJ_03545
N
0.000
MANI_026245
Metarhizium anisopliae
MANI_026245
N
0.000
MBR_07611
Metarhizium brunneum
MBR_07611
N
0.000
MGU_03902
Metarhizium guizhouense
MGU_03902
N
0.000
NechaG71135
Fusarium solani
NechaG71135
N
0.000
PFICI_08003
Pestalotiopsis fici
PFICI_08003
N
0.000
PODANS_7_2610
Podospora anserina
PODANS_7_2610
N
0.000
S40285_00214
Stachybotrys chlorohalonata
S40285_00214
N
0.000
S40288_02231
Stachybotrys chartarum
S40288_02231
N
0.000
SPBR_01267
Sporothrix brasiliensis
SPBR_01267
N
0.000
THITE_2155541
Thielavia terrestris
THITE_2155541
N
0.000
TRIATDRAFT_52152
Trichoderma atroviride
TRIATDRAFT_52152
N
0.000
UV8b_1336
Ustilaginoidea virens
UV8b_1336
N
0.000
VDBG_06797
Verticillium alfalfae
VDBG_06797
N
0.000
VDBG_06797
Verticillium albo atrum
VDBG_06797
N
0.000
VHEMI09995
Torrubiella hemipterigena
VHEMI09995
N
0.000
X797_003277
Metarhizium robertsii
X797_003277
N
0.000