OBART02G27940 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART02G27940 T275469_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.909 0.978
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.901 0.957
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.901 0.957
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.901 0.957
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.901 0.957
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.899 0.957
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.899 0.957
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.899 0.957
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.870
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.803 0.913
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.803 0.913
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.803 0.913
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G27940.1 Myb 37 82

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000828 Calypte anna Aan_R000828 I 0.000
Afo_R000910 Aptenodytes forsteri Afo_R000910 I 0.000
Brh_R007515 Buceros rhinoceros Brh_R007515 I 0.000
Cmyd_10007243 Chelonia mydas Cmyd_10007243 I 0.000
ENSAMEG00000007243 Ailuropoda melanoleuca ENSAMEG00000007243 I 0.000
ENSAMXG00000019065 Astyanax mexicanus ENSAMXG00000019065 I 0.000
ENSAPLG00000007892 Anas platyrhynchos ENSAPLG00000007892 I 0.000
ZZZ3 Bos taurus ENSBTAG00000017419 I 0.000
ENSBTAP00000041453-D1 Bos grunniens ENSBTAP00000041453-D1 I 0.000
ZZZ3 Canis familiaris ENSCAFG00000020376 I 0.000
ZZZ3 Choloepus hoffmanni ENSCHOG00000007997 I 0.000
ZZZ3 Callithrix jacchus ENSCJAG00000006894 I 0.000
ENSCPOG00000003135 Cavia porcellus ENSCPOG00000003135 I 0.000
ENSCSAG00000001398 Chlorocebus sabaeus ENSCSAG00000001398 I 0.000
zzz3 Danio rerio ENSDARG00000077581 I 0.000
ENSDNOG00000000463 Dasypus novemcinctus ENSDNOG00000000463 I 0.000
Zzz3 Dipodomys ordii ENSDORG00000010114 I 0.000
ZZZ3 Equus caballus ENSECAG00000011430 I 0.000
ZZZ3 Echinops telfairi ENSETEG00000013187 I 0.000
ENSFALG00000005715 Ficedula albicollis ENSFALG00000005715 I 0.000
ZZZ3 Felis catus ENSFCAG00000001415 I 0.000
ZZZ3 Homo sapiens ENSG00000036549 D 0.000
zzz3 Gasterosteus aculeatus ENSGACG00000016546 I 0.000
ZZZ3 Gallus gallus ENSGALG00000008988 I 0.000
ZZZ3 Gorilla gorilla ENSGGOG00000009242 I 0.000
ENSGMOG00000003250 Gadus morhua ENSGMOG00000003250 I 0.000
ENSLACG00000009877 Latimeria chalumnae ENSLACG00000009877 I 0.000
ZZZ3 Loxodonta africana ENSLAFG00000011398 I 0.000
ENSLOCG00000003656 Lepisosteus oculatus ENSLOCG00000003656 I 0.000
ENSMEUG00000007391 Macropus eugenii ENSMEUG00000007391 I 0.000
ZZZ3 Meleagris gallopavo ENSMGAG00000009582 I 0.000
ZZZ3 Myotis lucifugus ENSMLUG00000006175 I 0.000
ENSMMUG00000020219 Macaca mulatta ENSMMUG00000020219 I 0.000
ENSMODG00000010136 Monodelphis domestica ENSMODG00000010136 I 0.000
ENSMODG00000010367 Monodelphis domestica ENSMODG00000010367 I 0.000
ENSMODG00000024557 Monodelphis domestica ENSMODG00000024557 I 0.000
ENSMPUG00000010824 Mustela putorius furo ENSMPUG00000010824 I 0.000
Zzz3 Mus musculus ENSMUSG00000039068 I 0.000
ENSNLEG00000009672 Nomascus leucogenys ENSNLEG00000009672 I 0.000
ZZZ3 Ornithorhynchus anatinus ENSOANG00000015757 I 0.000
ENSOARG00000013012 Ovis aries ENSOARG00000013012 I 0.000
ZZZ3 Oryctolagus cuniculus ENSOCUG00000002167 I 0.000
ZZZ3 Otolemur garnettii ENSOGAG00000014210 I 0.000
ENSONIG00000018369 Oreochromis niloticus ENSONIG00000018369 I 0.000
ZZZ3 Ochotona princeps ENSOPRG00000013036 I 0.000
zzz3 Oryzias latipes ENSORLG00000003342 I 0.000
ENSP00000359837 Macaca fascicularis ENSP00000359837 I 0.000
ENSPANG00000005101 Papio anubis ENSPANG00000005101 I 0.000
ZZZ3 Procavia capensis ENSPCAG00000016692 I 0.000
ENSPFOG00000000834 Poecilia formosa ENSPFOG00000000834 I 0.000
ENSPMAG00000000497 Petromyzon marinus ENSPMAG00000000497 I 0.000
ENSPPYG00000001223 Pongo abelii ENSPPYG00000001223 I 0.000
ENSPSIG00000011052 Pelodiscus sinensis ENSPSIG00000011052 I 0.000
ZZZ3 Pan troglodytes ENSPTRG00000000881 I 0.000
ZZZ3 Pteropus vampyrus ENSPVAG00000017539 I 0.000
Zzz3 Rattus norvegicus ENSRNOG00000050321 I 0.000
ZZZ3 Sorex araneus ENSSARG00000004268 I 0.000
ENSSHAG00000002082 Sarcophilus harrisii ENSSHAG00000002082 I 0.000
ZZZ3 Sus scrofa ENSSSCG00000003772 I 0.000
ENSSTOG00000016454 Ictidomys tridecemlineatus ENSSTOG00000016454 I 0.000
ZZZ3 Taeniopygia guttata ENSTGUG00000007000 I 0.000
ENSTNIG00000006386 Tetraodon nigroviridis ENSTNIG00000006386 I 0.000
zzz3 Takifugu rubripes ENSTRUG00000006240 I 0.000
ENSTSYG00000001826 Tarsius syrichta ENSTSYG00000001826 I 0.000
ZZZ3 Vicugna pacos ENSVPAG00000001421 I 0.000
ENSXMAG00000016350 Xiphophorus maculatus ENSXMAG00000016350 I 0.000
fgenesh2_pg.scaffold_163000011 Branchiostoma floridae fgenesh2_pg.scaffold_163000011 I 0.000
fgenesh2_pg.scaffold_163000017 Branchiostoma floridae fgenesh2_pg.scaffold_163000017 I 0.000
Gfo_R009151 Geospiza fortis Gfo_R009151 I 0.000
LotgiG187172 Lottia gigantea LotgiG187172 I 0.000
Myotis_brandtii_ZZZ3_10032449 Myotis brandtii Myotis_brandtii_ZZZ3_10032449 I 0.000
Ocbimv22013214m.g Octopus bimaculoides Ocbimv22013214m.g I 0.000
Ogr17321 Ophisaurus gracilis Ogr17321 I 0.000
Pvit_10393 Pogona vitticeps Pvit_10393 I 0.000
Sakowv30043886m.g Saccoglossus kowalevskii Sakowv30043886m.g I 0.000
Tal_R004642 Tyto alba Tal_R004642 I 0.000
zzz3 Xenopus tropicalis XB-GENE-993548 I 0.000
XP_002939691 Xenopus tropicalis XP_002939691 I 0.000