OGLUM02G29720 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM02G29720 T275679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL11
M07134_2.00 		Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
AT5G45580_col_a 		0.833 0.872
PHL11
M07135_2.00 		Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN		 Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a 		0.833 0.872
PHL12
M01077_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Sullivan et al.(2014)
pTH7098 		0.780 0.809
AT3G24120
M00729_2.00 		Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN		 PBM
Chang et al.(2013)
pTH7086 		0.780 0.809
UNE16
M01270_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Lambert et al.(2019)
pTH9967 		0.780 0.809
PHL12
M07079_2.00 		Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY		 Dap-seq
OMalley et al.(2016)
At3g12730_col_a 		0.780 0.809
PHL12
M07080_2.00 		Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a 		0.780 0.809
AT3G24120
M07085_2.00 		Arabidopsis thaliana
HAKATTCB
VGAATMTD		 Dap-seq
OMalley et al.(2016)
At3g24120_col_a 		0.780 0.809
AT3G24120
M07086_2.00 		Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN		 Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a 		0.780 0.809
MYR1
M02309_2.00 		Arabidopsis thaliana
NKATNCBNNN
NNNVGNATMN		 PBM
Weirauch et al.(2014)
pTH8859 		0.767 0.809
MYR2
M02294_2.00 		Arabidopsis thaliana
NKATDCBNN
NNVGHATMN		 PBM
Weirauch et al.(2014)
pTH7097 		0.760 0.787
MYR2
M07063_2.00 		Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN		 Dap-seq
OMalley et al.(2016)
At3g04030_col_a 		0.760 0.787
MYR2
M07064_2.00 		Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB		 Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a 		0.760 0.787
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.735 0.745
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.735 0.745
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.730 0.766
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.729 0.809
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.729 0.809
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.729 0.809
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.729 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G29720.1 Myb 33 84

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

881 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R014132 Calypte anna Aan_R014132 I
Afo_R013608 Aptenodytes forsteri Afo_R013608 I
Brh_R008815 Buceros rhinoceros Brh_R008815 I
ENSACAG00000005519 Anolis carolinensis ENSACAG00000005519 I
ENSAMEG00000002645 Ailuropoda melanoleuca ENSAMEG00000002645 I
ENSAPLG00000011422 Anas platyrhynchos ENSAPLG00000011422 I
VEZF1 Bos taurus ENSBTAG00000004193 I
ENSBTAP00000005489-D1 Bos grunniens ENSBTAP00000005489-D1 I
VEZF1 Canis familiaris ENSCAFG00000017426 I
VEZF1 Choloepus hoffmanni ENSCHOG00000007280 I
VEZF1 Callithrix jacchus ENSCJAG00000014022 I
VEZF1 Cavia porcellus ENSCPOG00000002637 I
ENSCSAG00000005638 Chlorocebus sabaeus ENSCSAG00000005638 I
VEZF1 Dasypus novemcinctus ENSDNOG00000034294 I
VEZF1 Equus caballus ENSECAG00000016083 I
VEZF1 Erinaceus europaeus ENSEEUG00000009273 I
ENSFALG00000005040 Ficedula albicollis ENSFALG00000005040 I
VEZF1 Felis catus ENSFCAG00000004551 I
VEZF1 Homo sapiens ENSG00000136451 D
VEZF1 Gorilla gorilla ENSGGOG00000004387 I
VEZF1 Loxodonta africana ENSLAFG00000029087 I
VEZF1 Meleagris gallopavo ENSMGAG00000008207 I
VEZF1 Microcebus murinus ENSMICG00000016243 I
VEZF1 Myotis lucifugus ENSMLUG00000011019 I
VEZF1 Macaca mulatta ENSMMUG00000004723 I
ENSMMUP00000006278 Macaca fascicularis ENSMMUP00000006278 I
VEZF1 Monodelphis domestica ENSMODG00000014778 I
ENSMPUG00000015370 Mustela putorius furo ENSMPUG00000015370 I
Vezf1 Mus musculus ENSMUSG00000018377 I
ENSMUSG00000098546 Mus musculus ENSMUSG00000098546 I
ENSNLEG00000008084 Nomascus leucogenys ENSNLEG00000008084 I
VEZF1 Ornithorhynchus anatinus ENSOANG00000007321 I
ENSOARG00000008213 Ovis aries ENSOARG00000008213 I
VEZF1 Oryctolagus cuniculus ENSOCUG00000017673 I
VEZF1 Otolemur garnettii ENSOGAG00000014483 I
VEZF1 Ochotona princeps ENSOPRG00000000899 I
ENSPANG00000022307 Papio anubis ENSPANG00000022307 I
VEZF1 Procavia capensis ENSPCAG00000005140 I
ENSPSIG00000008918 Pelodiscus sinensis ENSPSIG00000008918 I
VEZF1 Pan troglodytes ENSPTRG00000009442 I
VEZF1 Pteropus vampyrus ENSPVAG00000000518 I
Vezf1 Rattus norvegicus ENSRNOG00000009819 I
ENSSHAG00000003506 Sarcophilus harrisii ENSSHAG00000003506 I
VEZF1 Sus scrofa ENSSSCG00000017623 I
ENSSSCG00000025930 Sus scrofa ENSSSCG00000025930 I
ENSSTOG00000000239 Ictidomys tridecemlineatus ENSSTOG00000000239 I
VEZF1 Tupaia belangeri ENSTBEG00000015173 I
ENSTGUG00000008421 Taeniopygia guttata ENSTGUG00000008421 I
ENSTGUG00000015998 Taeniopygia guttata ENSTGUG00000015998 I
VEZF1 Tursiops truncatus ENSTTRG00000007309 I
Gfo_R012754 Geospiza fortis Gfo_R012754 I
Myotis_brandtii_VEZF1_10020669 Myotis brandtii Myotis_brandtii_VEZF1_10020669 I
Tal_R013318 Tyto alba Tal_R013318 I
vezf1 Xenopus tropicalis XB-GENE-481523 I
vezf1.S Xenopus laevis XB-GENE-481527 I
vezf1.L Xenopus laevis XB-GENE-6256471 I