OGLUM06G04280 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM06G04280 T275752_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB98
M02301_2.00
Arabidopsis thaliana
NNGTAACGKMN

NKMCGTTACNN
PBM
Weirauch et al.(2014)
pTH8148
0.785 0.849
MYB98
M07108_2.00
Arabidopsis thaliana
DWWWHGTAACGKWHD

HDWMCGTTACDWWWH
Dap-seq
OMalley et al.(2016)
MYB98_col_a
0.785 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G04280.1 Myb 23 69
OGLUM06G04280.1 Myb 75 120

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
augustus_masked-nMf.1.1.scaf11440-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf11440-processed-gene-0.0 N
BXY_0600000 Bursaphelenchus xylophilus BXY_0600000 N
L596_g18998 Steinernema carpocapsae L596_g18998 N
L889_g16824 Steinernema feltiae L889_g16824 N
L892_g28062 Steinernema scapterisci L892_g28062 N
L893_g8502 Steinernema glaseri L893_g8502 N
MhA1_Contig134.frz3.gene34 Meloidogyne hapla MhA1_Contig134.frz3.gene34 N
Minc00429 Meloidogyne incognita Minc00429 N
Minc11430 Meloidogyne incognita Minc11430 N
PPA24751 Pristionchus pacificus PPA24751 N
RSKR_0000923100 Rhabditophanes kr3021 RSKR_0000923100 N