CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_012642
(
Oryza longistaminata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OLONG_012642
T275937_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.877
0.894
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.877
0.894
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.877
0.894
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.850
0.936
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN
NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.849
0.957
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD
HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.842
0.936
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN
NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.840
0.936
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN
NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.840
0.915
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.839
0.915
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.839
0.915
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.839
0.915
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN
NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.831
0.894
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.813
0.830
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.813
0.830
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.788
0.851
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.788
0.851
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.782
0.872
AT3G10580
M07072_2.00
Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT
Dap-seq
OMalley et al.(2016)
AT3G10580_col_a
0.720
0.702
AT3G10580
M07073_2.00
Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG
Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a
0.720
0.702
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.710
0.851
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.710
0.851
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.710
0.851
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_012642-R1
Myb
5
52
GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Oryza longistaminata
TFs
594 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_08815
Capronia coronata
A1O1_08815
N
A1O3_06358
Capronia epimyces
A1O3_06358
N
A1O5_12074
Cladophialophora psammophila
A1O5_12074
N
ARB_05101
Arthroderma benhamiae
ARB_05101
N
BDDG_01560
Blastomyces dermatitidis
BDDG_01560
N
ACLA_057380
Aspergillus clavatus
CADACLAG00005479
N
CADAFLAG00013320
Aspergillus flavus
CADAFLAG00013320
N
AFUA_8G04050
Aspergillus fumigatus
CADAFUAG00003174
N
CADANGAG00013376
Aspergillus niger
CADANGAG00013376
N
ANIA_01414
Aspergillus nidulans
CADANIAG00008025
N
CADAORAG00009949
Aspergillus oryzae
CADAORAG00009949
N
ATEG_00017
Aspergillus terreus
CADATEAG00006845
N
CIMG_04403
Coccidioides immitis
CIMG_04403
N
COCC4DRAFT_196527
Bipolaris maydis
COCC4DRAFT_196527
N
COCCADRAFT_86582
Bipolaris zeicola
COCCADRAFT_86582
N
COCMIDRAFT_1020
Bipolaris oryzae
COCMIDRAFT_1020
N
COCSADRAFT_236058
Bipolaris sorokiniana
COCSADRAFT_236058
N
COCVIDRAFT_89258
Bipolaris victoriae
COCVIDRAFT_89258
N
CPC735_073390
Coccidioides posadasii
CPC735_073390
N
estExt_fgenesh1_pg.C_180114
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_180114
N
estExt_Genewise1.C_50962
Cochliobolus heterostrophus C5
estExt_Genewise1.C_50962
N
e_gw1.00168.159.1
Aspergillus carbonarius
e_gw1.00168.159.1
N
G647_09336
Cladophialophora carrionii
G647_09336
N
H101_04238
Trichophyton interdigitale
H101_04238
N
H102_05474
Trichophyton rubrum
H102_05474
N
H105_05516
Trichophyton soudanense
H105_05516
N
HCBG_07066
Histoplasma capsulatum
HCBG_07066
N
HMPREF1120_09077
Exophiala dermatitidis
HMPREF1120_09077
N
LEMA_P074270.1
Leptosphaeria maculans
LEMA_P074270.1
N
MCYG_04601
Arthroderma otae
MCYG_04601
N
MCYG_04601
Microsporum canis
MCYG_04601
N
MGYG_08181
Microsporum gypseum
MGYG_08181
N
MPH_02576
Macrophomina phaseolina
MPH_02576
N
MYCFIDRAFT_217053
Pseudocercospora fijiensis
MYCFIDRAFT_217053
N
PABG_02006
Paracoccidioides brasiliensis
PABG_02006
N
Pc22g10070
Penicillium chrysogenum
Pc22g10070
N
PCH_Pc22g10070
Penicillium rubens
PCH_Pc22g10070
N
PDE_00973
Penicillium oxalicum
PDE_00973
N
PDIP_88910
Penicillium digitatum
PDIP_88910
N
PEX1_097650
Penicillium expansum
PEX1_097650
N
PITC_007200
Penicillium italicum
PITC_007200
N
PMAA_086780
Penicillium marneffei
PMAA_086780
N
PMAA_086780
Talaromyces marneffei
PMAA_086780
N
PTRG_08153
Pyrenophora triticirepentis
PTRG_08153
N
PTT_14589
Pyrenophora teres
PTT_14589
N
PV04_10035
Capronia semiimmersa
PV04_10035
N
PV05_03864
Exophiala xenobiotica
PV05_03864
N
PV06_06886
Exophiala oligosperma
PV06_06886
N
PV07_08929
Cladophialophora immunda
PV07_08929
N
PV08_07435
Exophiala spinifera
PV08_07435
N
PV10_01710
Exophiala mesophila
PV10_01710
N
PV11_05777
Exophiala sideris
PV11_05777
N
PVAR5_2342
Byssochlamys spectabilis
PVAR5_2342
N
SEPMUDRAFT_88495
Sphaerulina musiva
SEPMUDRAFT_88495
N
SETTUDRAFT_34428
Setosphaeria turcica
SETTUDRAFT_34428
N
SNOG_02548
Stagonospora nodorum
SNOG_02548
N
SNOG_02548
Phaeosphaeria nodorum
SNOG_02548
N
TEQG_02396
Trichophyton equinum
TEQG_02396
N
TESG_02756
Trichophyton tonsurans
TESG_02756
N
TSTA_122060
Talaromyces stipitatus
TSTA_122060
N
UCRNP2_5776
Neofusicoccum parvum
UCRNP2_5776
N
W97_03914
Coniosporium apollinis
W97_03914
N
Z517_09513
Fonsecaea pedrosoi
Z517_09513
N
Z518_07681
Rhinocladiella mackenziei
Z518_07681
N
Z519_12336
Cladophialophora bantiana
Z519_12336
N