ORUFI11G04860 (Oryza rufipogon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORUFI11G04860 T277070_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.897 0.957
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.897 0.957
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.830 0.892
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.684 0.731
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.664 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI11G04860.1 Myb 14 61
ORUFI11G04860.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza rufipogon TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R012851 Calypte anna Aan_R012851 I
Afo_R006429 Aptenodytes forsteri Afo_R006429 I
A_01406 Schistosoma haematobium A_01406 I
CLEC000256 Cimex lectularius CLEC000256 I
D917_09696 Trichinella nativa D917_09696 N
D918_08586 Trichuris suis D918_08586 N
DILT_0000300801 Diphyllobothrium latum DILT_0000300801 I
ECANG7_05018 Echinococcus canadensis ECANG7_05018 I
EEL_0000828301 Elaeophora elaphi EEL_0000828301 N
EFV62115 Trichinella spiralis EFV62115 N
EmuJ_000660100 Echinococcus multilocularis EmuJ_000660100 I
foxj1b Gasterosteus aculeatus ENSGACG00000004462 I
ENSGMOG00000015882 Gadus morhua ENSGMOG00000015882 I
ENSONIG00000019769 Oreochromis niloticus ENSONIG00000019769 I
ENSPFOG00000004597 Poecilia formosa ENSPFOG00000004597 I
FOXJ1 Taeniopygia guttata ENSTGUG00000008019 I
foxj1b Tetraodon nigroviridis ENSTNIG00000012916 I
foxj1b Takifugu rubripes ENSTRUG00000016940 I
EVEC_0001343201 Enterobius vermicularis EVEC_0001343201 N
HDID_0000845501 Hymenolepis diminuta HDID_0000845501 I
HmN_000875600 Hymenolepis microstoma HmN_000875600 I
HNAJ_0000187001 Hymenolepis nana HNAJ_0000187001 I
LOAG_18956 Loa loa LOAG_18956 N
nLs.2.1.2.g08818 Litomosoides sigmodontis nLs.2.1.2.g08818 N
nOo.2.0.1.g09031 Onchocerca ochengi nOo.2.0.1.g09031 N
nRc.2.0.1.g07784 Romanomermis culicivorax nRc.2.0.1.g07784 N
OFLC_0000364301 Onchocerca flexuosa OFLC_0000364301 N
SMUV_0000600001 Syphacia muris SMUV_0000600001 N
Tal_R007079 Tyto alba Tal_R007079 I
TASK_0000605401 Taenia asiatica TASK_0000605401 I
TMUE_s0025000400 Trichuris muris TMUE_s0025000400 N
TsM_000185900 Taenia solium TsM_000185900 I
TTAC_0000110701 Hydatigera taeniaeformis TTAC_0000110701 I
TTRE_0000137701 Trichuris trichiura TTRE_0000137701 N
WBGene00242350 Onchocerca volvulus WBGene00242350 N
foxj1.2 Xenopus tropicalis XB-GENE-919738 I
foxj1.2.L Xenopus laevis XB-GENE-919747 I