CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS03G0274300
(
Oryza sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OS03G0274300
T277157_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK21687.1
M01282_2.00
Cannabis sativa
HWAAACCYH
DRGGTTTWD
PBM
Lambert et al.(2019)
pTH11299
0.909
0.957
TRP2
M07092_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_col_a
0.901
0.936
TRP2
M07093_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_colamp_a
0.901
0.936
TRP1
M07148_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP1_col
0.891
0.957
TRP5
M01266_2.00
Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN
PBM
Lambert et al.(2019)
pTH9963
0.849
0.957
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS03T0274300-01
Myb
591
641
RRPFSVAEVEALVLAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLV
Links
Other
Myb/SANT
family TFs
Other
Oryza sativa
TFs
197 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_204101
Agaricus bisporus
AGABI2DRAFT_204101
N
0.000
CERSUDRAFT_114551
Ceriporiopsis subvermispora
CERSUDRAFT_114551
N
0.000
CY34DRAFT_611054
Suillus luteus
CY34DRAFT_611054
N
0.000
FIBRA_03527
Fibroporia radiculosa
FIBRA_03527
N
0.000
FOMPIDRAFT_1061694
Fomitopsis pinicola
FOMPIDRAFT_1061694
N
0.000
GALMADRAFT_249226
Galerina marginata
GALMADRAFT_249226
N
0.000
GLOTRDRAFT_127898
Gloeophyllum trabeum
GLOTRDRAFT_127898
N
0.000
JAAARDRAFT_89965
Jaapia argillacea
JAAARDRAFT_89965
N
0.000
M378DRAFT_76171
Amanita muscaria
M378DRAFT_76171
N
0.000
M404DRAFT_217927
Pisolithus tinctorius
M404DRAFT_217927
N
0.000
M407DRAFT_50255
Tulasnella calospora
M407DRAFT_50255
N
0.000
M413DRAFT_441957
Hebeloma cylindrosporum
M413DRAFT_441957
N
0.000
Moror_6826
Moniliophthora roreri
Moror_6826
N
0.000
PAXRUDRAFT_823158
Paxillus rubicundulus
PAXRUDRAFT_823158
N
0.000
PILCRDRAFT_101673
Piloderma croceum
PILCRDRAFT_101673
N
0.000
PISMIDRAFT_675296
Pisolithus microcarpus
PISMIDRAFT_675296
N
0.000
SCLCIDRAFT_1208555
Scleroderma citrinum
SCLCIDRAFT_1208555
N
0.000
SERLA73DRAFT_72613
Serpula lacrymans
SERLA73DRAFT_72613
N
0.000