CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFL1_05727
(
Pseudozyma flocculosa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PFL1_05727
T277506_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.801
0.891
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.801
0.891
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.774
0.837
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPQ26748
Myb
8
54
GGVWKNTEDEILKAAISKYGKNQWARISSLLVRKTPKQCKARWYEWL
EPQ26748
Myb
60
104
KTEWSKEEDEKLLHLAKLMPTQWRTIAPIVGRTANQCLERYQKLL
Links
Other
Myb/SANT
family TFs
Other
Pseudozyma flocculosa
TFs
568 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10017535
Chelonia mydas
Cmyd_10017535
N
BHLHE23
Callithrix jacchus
ENSCJAG00000010053
I
ENSCPOG00000023417
Cavia porcellus
ENSCPOG00000023417
N
Myotis_brandtii_BHLHE22_10010620
Myotis brandtii
Myotis_brandtii_BHLHE22_10010620
I
PPAI001169
Phlebotomus papatasi
PPAI001169
I
Pvit_13876
Pogona vitticeps
Pvit_13876
N