PGSC0003DMG400003316 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400003316 T277534_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.808 0.871
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.806 0.882
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.806 0.882
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.797 0.903
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.772 0.828
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.772 0.828
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.772 0.828
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.733 0.796
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.733 0.796
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.733 0.796
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.733 0.796
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.733 0.796
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.669 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400008569 Myb 14 60
PGSC0003DMT400008569 Myb 66 111

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

285 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007136 Calypte anna Aan_R007136 I
Afo_R002865 Aptenodytes forsteri Afo_R002865 I
Alligator_sinensis_CCG009966.1 Alligator sinensis Alligator_sinensis_CCG009966.1 I
Brh_R001567 Buceros rhinoceros Brh_R001567 I
Cmyd_10017008 Chelonia mydas Cmyd_10017008 I
IKZF5 Anolis carolinensis ENSACAG00000017468 I
ENSAMEG00000004665 Ailuropoda melanoleuca ENSAMEG00000004665 I
ENSAPLG00000015301 Anas platyrhynchos ENSAPLG00000015301 I
IKZF5 Bos taurus ENSBTAG00000023847 I
ENSBTAP00000032681-D1 Bos grunniens ENSBTAP00000032681-D1 I
IKZF5 Canis familiaris ENSCAFG00000030765 I
IKZF5 Callithrix jacchus ENSCJAG00000001109 I
ENSCPOG00000021914 Cavia porcellus ENSCPOG00000021914 I
ENSCPOG00000025133 Cavia porcellus ENSCPOG00000025133 I
ENSCSAG00000004558 Chlorocebus sabaeus ENSCSAG00000004558 I
ikzf5 Danio rerio ENSDARG00000056491 I
IKZF5 Dasypus novemcinctus ENSDNOG00000011974 I
ENSDORG00000011805 Dipodomys ordii ENSDORG00000011805 I
IKZF5 Equus caballus ENSECAG00000006987 I
ENSETEG00000002138 Echinops telfairi ENSETEG00000002138 I
ENSETEG00000004201 Echinops telfairi ENSETEG00000004201 I
ENSETEG00000017021 Echinops telfairi ENSETEG00000017021 I
ENSFALG00000004728 Ficedula albicollis ENSFALG00000004728 I
IKZF5 Felis catus ENSFCAG00000009589 I
IKZF5 Homo sapiens ENSG00000095574 I
ikzf5 Gasterosteus aculeatus ENSGACG00000009720 I
ENSGALG00000026700 Gallus gallus ENSGALG00000026700 I
IKZF5 Gorilla gorilla ENSGGOG00000003823 I
ENSLACG00000006175 Latimeria chalumnae ENSLACG00000006175 I
IKZF5 Loxodonta africana ENSLAFG00000012381 I
ENSLOCG00000008225 Lepisosteus oculatus ENSLOCG00000008225 I
IKZF5 Meleagris gallopavo ENSMGAG00000011599 I
ENSMICG00000000457 Microcebus murinus ENSMICG00000000457 I
IKZF5 Myotis lucifugus ENSMLUG00000009538 I
IKZF5 Macaca mulatta ENSMMUG00000023480 I
ENSMODG00000007802 Monodelphis domestica ENSMODG00000007802 I
ENSMPUG00000002786 Mustela putorius furo ENSMPUG00000002786 I
Ikzf5 Mus musculus ENSMUSG00000040167 D
ENSNLEG00000027055 Nomascus leucogenys ENSNLEG00000027055 I
IKZF5 Ornithorhynchus anatinus ENSOANG00000001994 I
ENSOARG00000009064 Ovis aries ENSOARG00000009064 I
IKZF5 Oryctolagus cuniculus ENSOCUG00000013340 I
IKZF5 Otolemur garnettii ENSOGAG00000032070 I
ENSONIG00000016036 Oreochromis niloticus ENSONIG00000016036 I
IKZF5 Ochotona princeps ENSOPRG00000014214 I
ENSP00000357881 Macaca fascicularis ENSP00000357881 I
ENSPANG00000020471 Papio anubis ENSPANG00000020471 I
IKZF5 Procavia capensis ENSPCAG00000012387 I
ENSPSIG00000008029 Pelodiscus sinensis ENSPSIG00000008029 I
IKZF5 Pan troglodytes ENSPTRG00000003019 I
IKZF5 Pteropus vampyrus ENSPVAG00000016435 I
Ikzf5 Rattus norvegicus ENSRNOG00000025651 I
ENSSHAG00000011508 Sarcophilus harrisii ENSSHAG00000011508 I
IKZF5 Sus scrofa ENSSSCG00000023565 I
ENSSTOG00000028669 Ictidomys tridecemlineatus ENSSTOG00000028669 I
IKZF5 Tupaia belangeri ENSTBEG00000004379 I
ENSTGUG00000011361 Taeniopygia guttata ENSTGUG00000011361 I
IKZF5 Takifugu rubripes ENSTRUG00000010762 I
ENSTSYG00000003383 Tarsius syrichta ENSTSYG00000003383 I
ENSXMAG00000016661 Xiphophorus maculatus ENSXMAG00000016661 I
Gfo_R011989 Geospiza fortis Gfo_R011989 I
Myotis_brandtii_IKZF5_10011368 Myotis brandtii Myotis_brandtii_IKZF5_10011368 I
Myotis_brandtii_IKZF5_10011632 Myotis brandtii Myotis_brandtii_IKZF5_10011632 I
Pvit_17596 Pogona vitticeps Pvit_17596 I
Tal_R009868 Tyto alba Tal_R009868 I
ikzf5 Xenopus tropicalis XB-GENE-978531 I
ikzf5.L Xenopus laevis XB-GENE-978537 I