PGSC0003DMG400023534 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400023534 T277665_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.870 0.936
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.809 0.872
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.805 0.872
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.805 0.872
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.804 0.936
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.802 0.936
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.689 0.851
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.675 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400060506 Myb 221 271
PGSC0003DMT400060507 Myb 221 250

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

497 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011359 Aedes aegypti AAEL011359 N 0.000
AALB003318 Anopheles albimanus AALB003318 N 0.000
AARA010518 Anopheles arabiensis AARA010518 N 0.000
AATE012701 Anopheles atroparvus AATE012701 N 0.000
ACEP10864 Atta cephalotes ACEP10864 N 0.000
ACOM037786 Anopheles coluzzii ACOM037786 N 0.000
ACUA009064 Anopheles culicifacies ACUA009064 N 0.000
ACUA021284 Anopheles culicifacies ACUA021284 N 0.000
ADAC003441 Anopheles darlingi ADAC003441 N 0.000
ADIR001048 Anopheles dirus ADIR001048 N 0.000
AEPI002999 Anopheles epiroticus AEPI002999 N 0.000
AFAF003258 Anopheles farauti AFAF003258 N 0.000
AFUN002858 Anopheles funestus AFUN002858 N 0.000
AGAP013287 Anopheles gambiae AGAP013287 N 0.000
AMAM002295 Anopheles maculatus AMAM002295 N 0.000
AMEC007532 Anopheles melas AMEC007532 N 0.000
AMEM000708 Anopheles merus AMEM000708 N 0.000
AMIN005282 Anopheles minimus AMIN005282 N 0.000
AQUA008196 Anopheles quadriannulatus AQUA008196 N 0.000
ASIS002506 Anopheles sinensis ASIS002506 N 0.000
ASTEI10578 Anopheles stephensi ASTEI10578 N 0.000
Cflo_11381--XP_391906.3_APIME Camponotus floridanus Cflo_11381--XP_391906.3_APIME N 0.000
CpipJ_CPIJ019088 Culex pipiens CpipJ_CPIJ019088 N 0.000
NFAT Drosophila melanogaster FBgn0030505 N 0.000
GA10815 Drosophila pseudoobscura FBgn0070871 N 0.000
GF21808 Drosophila ananassae FBgn0098808 N 0.000
GG17798 Drosophila erecta FBgn0110020 N 0.000
GH12805 Drosophila grimshawi FBgn0120284 N 0.000
GI15077 Drosophila mojavensis FBgn0137827 N 0.000
GL22604 Drosophila persimilis FBgn0160195 N 0.000
GM17623 Drosophila sechellia FBgn0172531 N 0.000
GJ18884 Drosophila virilis FBgn0206030 N 0.000
GK24938 Drosophila willistoni FBgn0226897 N 0.000
GE17094 Drosophila yakuba FBgn0234577 N 0.000
GB45138 Apis mellifera GB45138 N 0.000
HHAL007230-PA Halyomorpha halys HHAL007230-PA N 0.000
Hsal_04301--XP_391906.3_APIME Harpegnathos saltator Hsal_04301--XP_391906.3_APIME N 0.000
KGM_16908 Danaus plexippus KGM_16908 N 0.000
L798_07911 Zootermopsis nevadensis L798_07911 N 0.000
LDEC006285 Leptinotarsa decemlineata LDEC006285 N 0.000
MDOA013115 Musca domestica MDOA013115 N 0.000
NV18092 Nasonia vitripennis NV18092 N 0.000
PHUM363570 Pediculus humanus PHUM363570 N 0.000
SINV15756 Solenopsis invicta SINV15756 N 0.000
TC014708 Tribolium castaneum TC014708 N 0.000