CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Phyra78879
(
Phytophthora ramorum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Phyra78879
T277880_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra78879
Myb
39
84
GTWTIEEHELFLEGLNLYPSGPWKRVAQHIGSRTPRQVMTHAQKYR
Links
Other
Myb/SANT
family TFs
Other
Phytophthora ramorum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_kg.C_01146
Phytophthora capsici
estExt_fgenesh1_kg.C_01146
N
0.769
estExt_fgenesh1_kg.C_01153
Phytophthora capsici
estExt_fgenesh1_kg.C_01153
N
0.723
estExt_fgenesh1_pm.C_680840001
Phytophthora capsici
estExt_fgenesh1_pm.C_680840001
N
0.685
F443_05985
Phytophthora parasitica
F443_05985
N
0.744
F443_05992
Phytophthora parasitica
F443_05992
N
0.803
F443_20702
Phytophthora parasitica
F443_20702
I
0.699
fgenesh_scip_prom.28083.11537
Phytophthora lateralis
fgenesh_scip_prom.28083.11537
N
0.875
fgenesh_scip_prom.28083.3854
Phytophthora lateralis
fgenesh_scip_prom.28083.3854
N
0.680
fgenesh_scip_prom.46568.7328
Phytophthora kernoviae
fgenesh_scip_prom.46568.7328
N
0.692
fgenesh_scip_prom.46568.9767
Phytophthora kernoviae
fgenesh_scip_prom.46568.9767
N
0.662
fgenesh_scip_prom.46568.9768
Phytophthora kernoviae
fgenesh_scip_prom.46568.9768
N
0.670
HpaG810857
Hyaloperonospora arabidopsidis
HpaG810857
I
0.688
HpaG811464
Hyaloperonospora arabidopsidis
HpaG811464
N
0.680
maker-pir_contig_524-snap-gene-0.9
Pythium irregulare
maker-pir_contig_524-snap-gene-0.9
N
0.692
maker-piw_contig_637-snap-gene-0.12
Pythium iwayamai
maker-piw_contig_637-snap-gene-0.12
N
0.666
maker-piw_contig_841-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_841-fgenesh-gene-0.2
N
0.692
maker-pve_contig_871-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_871-fgenesh-gene-0.0
N
0.710
Phyra73320
Phytophthora ramorum
Phyra73320
N
0.680
Phyra80922
Phytophthora ramorum
Phyra80922
N
0.670
Physo132965
Phytophthora sojae
Physo132965
N
0.670
Physo133514
Phytophthora sojae
Physo133514
N
0.795
Physo133517
Phytophthora sojae
Physo133517
N
0.795
PITG_11223
Phytophthora infestans
PITG_11223
N
0.803